Gene Strop_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3330 
Symbol 
ID5059795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3822088 
End bp3822777 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content67% 
IMG OID640475578 
Producthypothetical protein 
Protein accessionYP_001160142 
Protein GI145595845 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0172089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGC CCCAGGAGAA GGTCTCGTTC GGCCAGCGAC TGAAGCAGAT CGGGATGGTG 
TTTCGGTTCA CCGCCAAGCA GGACCGGTGG TTCGCGCCCC TGGCCTTCGC CGCGGTGGTC
ATCCCACTCG CGTTGACCGT GGTGGCGTTC TTCGTGTGGG GCTGGCTCTG GATCCCACTG
GGCATCCTGG TGACGCTGCT CTCCCTGCTG ATCGTGCTCA ACCTGCGATC CAACCGGGCG
ATGATGAACG CCGCTGAGGG TCAGCCGGGC GCGGCCGCGC AGATCATCGA GAACATGCGC
GGCGACTGGC GGGTCACCCC GGCTGTCAGC TCGACCACGC AGATGGACAT GGTGCACCTG
GTCATCGGCC GTTCGGGGGT GATCCTGCTG GCGGAGGGGA ACCCGCAGCG GGTGCGCAGC
CTGCTCGGTC AGGAGAAGCG TCGGTTGGCC AAGGTGATCG GCTCGGCGCC GCTCTACGAC
TACGTGATCG GCCAGGAGGA AGGCGAGCTG CCGGTCCGAA AGCTGCGGAT GACCCTCATG
CGGTTGCCGC GCAAGCTCGG TCGCCGGGAT ATCAATGCGC TGGACAAGCG CCTCAAGGCG
CTCAGTGCCC GCCCGCAGCT GCCGAAGGGT GCCATCCCGA AGAACATGCG TCCTCCGAAG
GGCGCCTTCC GCCAGGCCCG CGGTCGCTGA
 
Protein sequence
MAKPQEKVSF GQRLKQIGMV FRFTAKQDRW FAPLAFAAVV IPLALTVVAF FVWGWLWIPL 
GILVTLLSLL IVLNLRSNRA MMNAAEGQPG AAAQIIENMR GDWRVTPAVS STTQMDMVHL
VIGRSGVILL AEGNPQRVRS LLGQEKRRLA KVIGSAPLYD YVIGQEEGEL PVRKLRMTLM
RLPRKLGRRD INALDKRLKA LSARPQLPKG AIPKNMRPPK GAFRQARGR