Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3330 |
Symbol | |
ID | 5059795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3822088 |
End bp | 3822777 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640475578 |
Product | hypothetical protein |
Protein accession | YP_001160142 |
Protein GI | 145595845 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0172089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGC CCCAGGAGAA GGTCTCGTTC GGCCAGCGAC TGAAGCAGAT CGGGATGGTG TTTCGGTTCA CCGCCAAGCA GGACCGGTGG TTCGCGCCCC TGGCCTTCGC CGCGGTGGTC ATCCCACTCG CGTTGACCGT GGTGGCGTTC TTCGTGTGGG GCTGGCTCTG GATCCCACTG GGCATCCTGG TGACGCTGCT CTCCCTGCTG ATCGTGCTCA ACCTGCGATC CAACCGGGCG ATGATGAACG CCGCTGAGGG TCAGCCGGGC GCGGCCGCGC AGATCATCGA GAACATGCGC GGCGACTGGC GGGTCACCCC GGCTGTCAGC TCGACCACGC AGATGGACAT GGTGCACCTG GTCATCGGCC GTTCGGGGGT GATCCTGCTG GCGGAGGGGA ACCCGCAGCG GGTGCGCAGC CTGCTCGGTC AGGAGAAGCG TCGGTTGGCC AAGGTGATCG GCTCGGCGCC GCTCTACGAC TACGTGATCG GCCAGGAGGA AGGCGAGCTG CCGGTCCGAA AGCTGCGGAT GACCCTCATG CGGTTGCCGC GCAAGCTCGG TCGCCGGGAT ATCAATGCGC TGGACAAGCG CCTCAAGGCG CTCAGTGCCC GCCCGCAGCT GCCGAAGGGT GCCATCCCGA AGAACATGCG TCCTCCGAAG GGCGCCTTCC GCCAGGCCCG CGGTCGCTGA
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Protein sequence | MAKPQEKVSF GQRLKQIGMV FRFTAKQDRW FAPLAFAAVV IPLALTVVAF FVWGWLWIPL GILVTLLSLL IVLNLRSNRA MMNAAEGQPG AAAQIIENMR GDWRVTPAVS STTQMDMVHL VIGRSGVILL AEGNPQRVRS LLGQEKRRLA KVIGSAPLYD YVIGQEEGEL PVRKLRMTLM RLPRKLGRRD INALDKRLKA LSARPQLPKG AIPKNMRPPK GAFRQARGR
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