| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3320 |
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| Symbol | |
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| ID | 5059785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3808749 |
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| End bp | 3810578 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640475568 |
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| Product | dihydrolipoyllysine-residue succinyltransferase |
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| Protein accession | YP_001160132 |
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| Protein GI | 145595835 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
[TIGR02927] 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTAT CGGTCACCAT GCCCCGGCTC GGTGAGAGCG TCACCGAGGG CACCGTCACG
CGCTGGCTCA AGCAGGAGGG CGACACCGTC GAGGTCGACG AGCCGCTGCT CGAGGTGTCG
ACCGACAAGG TGGACACCGA GATCCCGTCC CCCGCGGCCG GCGTGCTGAC CCGCATCGTG
GTCGGCGAGG ACGAGACCGC CGAGGTCGGC AGCGAGCTGG CGACGATCGG CGATGAGGCG
TCGGGCGACA ACGGGGCGAC GGGCGGCGGC GAGGCCGAGT CGCGGCAGTC GGCGCCCGAG
CCCACCGCCG CCGCCGAGGG CACGGGCCCG GAGCCGGAGC AGGAGCAGGA GCAGGAGCAG
CCGGCTCCTG CGCCGTCGGG CGAGGGCAAC CCGGTGACGA TGCCGGCGCT CGGCGAGAGC
GTCACCGAGG GCACGGTCAC CCGCTGGCTC AAGCAGGTCG GCGACACCGT CGAGGTCGAC
GAGCCGCTGC TCGAGGTGTC GACCGACAAG GTGGACACCG AGATCCCCTC GCCGGTCGCC
GGGACCGTCC TGGAGATCAC CGTGGCGGAG GACGAGACCG CCGATGTCGG TGCGACGCTG
GCGGTCGTCG GCACGGCCGG TGCCGCGGCG AAGCCCGAGC CCGAGGCGAA GCCCAAGCCC
GAGGCGAAGC CCAAGCCCGA GGCGAAGCCC GAGCCCGAGG CGAAGCCCGA GCCCGAGGCG
AAGCCCGAGC CCGAGGCGAA GCCCGAGCCG AAGGTCACCG AACCGACCCC GGGCGCCTCC
TACAACGAGC CGGCGGCCGA GACCGAGAGC GCCTCCGACC CGGCGAAGGC AGAGCAGGCC
GCCGCCCCCT CGGCGCCCGC CTCCCGGCCG GCGACGACCG GCGGTACGGA GAACGCCGGC
TACGTCACCC CACTGGTCCG CAAGCTCGCC GGCGAGCACG GGGTTGACCT CTCCACGATC
AACGGCACCG GCGTTGGTGG CCGGATCCGC AAGCAGGATG TGCTCGACGC GGCCGAGCAG
GCCCGCGCCG CCAAGGCGGC TCCGGCCCCG GCGGCGCAGC CCGCCGCCCC CGCGGCGAAG
CCTGCTGCCC GGCCCACGCC CAGCAGCAAG CGGGGTACCA CCGAGAAGCT GCCACGGATC
CGCGCGACCA TCGCGAAGCG GATGCACGAG TCGCTGCACG AGATGGCGCA GCTCACCACC
GTGGTCGAGG TTGACGTCAC CCGGATCGCC AAGCTGCGGG CGCAGGCGAA GGACGCCTTC
CAGCAGCGGC ACGGCGTAAA GCTGTCCTTC CTGCCGTTCT TCGCCCAGGC GGCCGTCGAG
GCGTTGCAGG CCTACCCGAT CGTCAACGCC CAGATGGACC TGACGGCGGG GAAGATCACC
TACCCGGAGG CGGAGCACCT CGGCGTCGCC GTGGACACCG AGCGCGGCCT GATGGTGCCG
GTCATCCACA ACGCCGGCGA CCTCAACCTG GGTGGCATCG CCAAGCGGGT CGCCGACCTC
GCCGAGCGCA CCCGCACCAA CAAGATCAGC CCGGATGAGC TCGCTGGTGC GACGTTCACG
CTGACCAACA CCGGCAGCCG GGGTGCCCTC TTCGACACCC CGATCGTGCC GTCGCCGCAG
TCGGCGATGC TCGGCACGGG TGCCGTGGTC AAGCGCCCGG TCGTGGTCAA CGACCCCGAC
CTGGGTGAGG TCGTGGCCGT CCGGTCGATG ATCTACCTGG CCCTCTCCTA CGACCACCGA
CTGATCGACG GTGCGGACGC GGCCCGCTTC CTGGGCACGA TCAAGGAGCG GCTGGAAGCC
GGCAACTTCG AGGCCGAACT GGGCCGGTAA
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| Protein sequence | MPVSVTMPRL GESVTEGTVT RWLKQEGDTV EVDEPLLEVS TDKVDTEIPS PAAGVLTRIV
VGEDETAEVG SELATIGDEA SGDNGATGGG EAESRQSAPE PTAAAEGTGP EPEQEQEQEQ
PAPAPSGEGN PVTMPALGES VTEGTVTRWL KQVGDTVEVD EPLLEVSTDK VDTEIPSPVA
GTVLEITVAE DETADVGATL AVVGTAGAAA KPEPEAKPKP EAKPKPEAKP EPEAKPEPEA
KPEPEAKPEP KVTEPTPGAS YNEPAAETES ASDPAKAEQA AAPSAPASRP ATTGGTENAG
YVTPLVRKLA GEHGVDLSTI NGTGVGGRIR KQDVLDAAEQ ARAAKAAPAP AAQPAAPAAK
PAARPTPSSK RGTTEKLPRI RATIAKRMHE SLHEMAQLTT VVEVDVTRIA KLRAQAKDAF
QQRHGVKLSF LPFFAQAAVE ALQAYPIVNA QMDLTAGKIT YPEAEHLGVA VDTERGLMVP
VIHNAGDLNL GGIAKRVADL AERTRTNKIS PDELAGATFT LTNTGSRGAL FDTPIVPSPQ
SAMLGTGAVV KRPVVVNDPD LGEVVAVRSM IYLALSYDHR LIDGADAARF LGTIKERLEA
GNFEAELGR
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