Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3298 |
Symbol | trpD |
ID | 5059763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3783272 |
End bp | 3784333 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640475546 |
Product | anthranilate phosphoribosyltransferase |
Protein accession | YP_001160110 |
Protein GI | 145595813 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.551935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.195602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGAAC GGACCTGGCC GCATCTGCTC GCCGCGCTGC TGCGCGGCGA CGAGCTCTGC ACTGCCGACA CCGCCTGGGC GATGGGTGAG ATCATGTCCG GCTCGGCGGG CCCGGCGCAG ATCGCCGGGT TCGCCGTCGC CTTGCGGGCC AAGGGTGAGA CCCCCACTGA GCTTGCCGGT CTGGTCGAGG CGATGCTCAC GCACGCCGTT CCGGTCAATC TGCCCGCGGA GCTACGCGCA ACCGCAGTGG ATGTGGTGGG CACCGGTGGC GATCTCGCGC ACACCGTGAA CATCTCCACC ATGGCCTCCC TGGTGGTCGC CGGAGCCGGC GTGCGGGTGG TCAAGCACGG CAACCGGGCC GCTTCCTCGT CCTGCGGCAC CGCGGACGTA CTGGAGTTCC TCGGACTACC CCTGGACTTG GGCCCCGAGG CGGTGGCGAC CTGCGTCGCC GAGGCGGGGA TCGGCTTCTG CTTCGCCGCC CGGTTCCACC CCGGAATGCG CCACGCTGGC CCGGTCCGAC GGGAGTTGGG CGTACCAACC GCCTTCAACT TCCTCGGCCC ACTCACCAAC CCGGCTCGTC CCCGAGCTGG CGCGGTCGGC TGCTTCGACG CCCGGATGGC GCCGGTCATG GCCGCGGTCT TCGCCGCGCG CGGTGACTCG GCGCTCGTCC TGCGCGGCGA GGACGGACTC GACGAGTTCA CCACCGCCGC TCCCACCCGG GTCTGGGCGG CACAGGATGG CACGGTTCGG GAGGCGCTGC TCGACGCGAC CGACCTTGGG ATACCCCGGG CCACCCTCGC CGACCTACGC GGCGGTGACG TCGCCTACAA CGCCGAGGCG GTACGCCGCC TACTGGCCGG GGAGACCGGG CCGGTGCGGG ACGCGGTGCT GGTCAACGCT GCCGCAGCGC TCGCCACCCA GGGGCCCCTG GACGCAGACC TGACCGAGGC GCTACAGGCC GGTCTTCTCC GCGCCGCCGA TTCGATCGAC TCCGGCGCCG CGGCCCGCAC TCTGGAGCGC TGGATCGACG TCGCCCAAAC CGTAAGGCCG GCGGCCGTCT GA
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Protein sequence | MGERTWPHLL AALLRGDELC TADTAWAMGE IMSGSAGPAQ IAGFAVALRA KGETPTELAG LVEAMLTHAV PVNLPAELRA TAVDVVGTGG DLAHTVNIST MASLVVAGAG VRVVKHGNRA ASSSCGTADV LEFLGLPLDL GPEAVATCVA EAGIGFCFAA RFHPGMRHAG PVRRELGVPT AFNFLGPLTN PARPRAGAVG CFDARMAPVM AAVFAARGDS ALVLRGEDGL DEFTTAAPTR VWAAQDGTVR EALLDATDLG IPRATLADLR GGDVAYNAEA VRRLLAGETG PVRDAVLVNA AAALATQGPL DADLTEALQA GLLRAADSID SGAAARTLER WIDVAQTVRP AAV
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