Gene Strop_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3249 
Symbol 
ID5059714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand- 
Start bp3725078 
End bp3725767 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content73% 
IMG OID640475497 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001160061 
Protein GI145595764 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.64355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.467888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGGCA GACAGTTGAA CTGGGACCAG TACGCCTCGG CCTGGGCGCG CCTGCATGGT 
GGGTTCGATC CGCGCTCTGC GGCCCCGCCC GTCCGGGCCT GGCTGCGCCT CGCGTACCAC 
GGGGGCTACG TGCTGGGCCG GCTGCGGGTC ACCCCGACCG CGGTGACCGT CGTCGGGGTG 
CTGCTCTGCT TCGGCGTGCC GCTGGTTGCG ATACGCCCGC AGGACGGGCC CTTCCTCGGC 
GCGTTGCTGG TCCTGCTCGC CTCGGTGGCG GACAGCCTCG ACGGCGCGGT CGCGGTGGCG 
AGCAACCGCA CCACCCGGCT CGGGTACGTC TACGACTCGG TGGCTGACCG GCTCGGTGAG 
GCGGCCTGGC TGGTCGCGTT CTGGCTGCTC GGCGCGCCCG GCGCGCTGGT GGCCGCCGGT 
GGTGCGCTCT CCTGGCTGCA CGAGTACGTG CGTGCCCGGG CGACCTCTGC CGGAATGCGA 
GAGATCGGTG CGGTGACCGT GGGGGAGCGG CCAACCCGGG TCGTGGTGGC CCTCGTCGGC 
CTGTTGCTGG CCGGGCTGAC GGGGCTGATC GAGCCTGACC TGGCCGCGGG CACCATCACC 
ATGGCGAGCG CGGTCTGGGC GTTGCTGGCC GGCTTCGGCC TTGGGCAGCT ACTGGCCGCG 
GTTCGGGGCG CACTGATCAA CGCCAGCTGA
 
Protein sequence
MVGRQLNWDQ YASAWARLHG GFDPRSAAPP VRAWLRLAYH GGYVLGRLRV TPTAVTVVGV 
LLCFGVPLVA IRPQDGPFLG ALLVLLASVA DSLDGAVAVA SNRTTRLGYV YDSVADRLGE 
AAWLVAFWLL GAPGALVAAG GALSWLHEYV RARATSAGMR EIGAVTVGER PTRVVVALVG 
LLLAGLTGLI EPDLAAGTIT MASAVWALLA GFGLGQLLAA VRGALINAS