| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3231 |
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| Symbol | |
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| ID | 5059696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3700776 |
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| End bp | 3703526 |
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| Gene Length | 2751 bp |
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| Protein Length | 916 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640475479 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001160043 |
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| Protein GI | 145595746 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.154079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCTCG CTGTCGTTCT CGGCGGGCAG TTCCTCCTCG CCGCCGTAGC GCCGGTTCTG
ACCTGGTGGT TGGGGCGCAA CGCCGGCTAC GCGCTCGCCG TGGGCTACCT GGTCGGGGCG
GGTCTGCTCT TCTCCCAGCG CCCGCTACTC CTCGCCGATC AGGCGGTCAC CCTCTCCTGG
CCGTGGCTGC CGTCGCTGGG GGTCTTCGCG GAACTGCGGA TGGACGCACT CAGTCTCATC
TTCGCCCTGC TGGTGCTGGC GGTGGGTGCG TTCGTCATGG CGTACTGTCC GCGCTATCTG
AGCCCGGACA GCCGGCACAC CCGGGTGTAC GTGACGATGA CCCTCTTCGC CGCCGCGATG
CTGGGTCTGG TGCTCGCCGA CGACCTGCTG CTGCTGTTCG TCTTCTGGGA GCTGTCCAGC
ATCCTGTCGT TCGTCCTCAT CGGGCAGGGT GGCCGCCCGC AGGCCCGCGG GCCGGCGATC
CAGGCCCTCT TCGTCACCAC CACCGGTGGC GTGGCACTGC TGGTGGCGGT GGTGGTGCTC
AGTGCGAGTC TCGGCACCAG CGACCTCGAC GAGATCCTGG CCGACCCGGG CCGGCTGGCG
ACCGGACCCG CCTGGGCGGC GGGTGCCCTG GTGATCTTCG CGGCCATCAC GAAGTCGGCG
CAGGTGCCGT TCCACTTCTG GCTGCCCGGC GCCATGGTCG CCCTCACCCC GGTCAGCGCC
TACCTGCACG CCGCCACGCT GGTAAAGGCG GGGATCTACC TGCTGATGCG CTTCTCGGCG
CTCTTTGGTG GTCAGTGGCC GTGGGACCTC ACGCTGATCG GCCTCGGGTT GATCACCGCG
GTCGTCGGCG CGCTGTTGGC GCTTCGCCAA CACGACCTCA AGGCGTTGCT CGCGTACTCC
ACGGTGAGCC AACTCGGCCT GCTGGTCAGC GTCATCGGCG TCGGCACGCC TGCTTCGGAC
GCGGCGGCGA TCCTTTACAC GATCGCGCAC GCCCTGTTCA AGGCAACGCT GTTCATGCTG
GTCGGAATCA TCGATCGCCA GGCGGGCAGC CGGGATATCC GGGCCCTGAC CGGGCTGTGG
CGGGCGATGC CGATCACCGT GACGCTCACC GTGCTGGCGG CCATGTCGTT GGCCGGCCTG
CCACCGACGA TCGGCTTTGT CGGGAAAGAG GCGATCTTTG AGGCACTCAC CACGGTGCAC
GAGCTGCCCT GGCTCGGGTG GGTGGCCGCC GGCCTGGCGG TGCTTGCCGC GGCACTGACC
TTCGCGTACG CGGCGCGGCT GGTCCATGGT GTCCTCTCCG GCCCGATCCG GCAGCGTGAG
CTGCACGAAC CAGCCTGGTC GTTCCTTGCT CCGGCAGCCG TCGCGGCAGT CCTCGCCACC
GCCCTCGGTC CGGCCGTCGC CGTCCTCAGC CCAATGGTGG AGCGGGCCGC CAGCGATGCC
CGGCCCCAGG GACAGCCGCC CTACCTGGCC TTCTGGCACG GCTTTACGCC GGCGCTCGGG
CTCTCCGCGC TCACCGTCCT GCTCGGGATG CTGCTGTTCT GGTACCGGCG CCGGACCGAC
CCGGTACTCG CGGCGATACC GACCACTTCG CCGTTCACCG GCTACCTCGA GCGATGGCGG
CGTGCGTTAC TGCGCATCGG GGCATTCGTG GCCCGACCCG CCCAGGTCAC GGCTCCCGCT
CCCTACCTGG CCCGGCCGCT GCTCGCCGTG GTGGCGCTGG CGGCGGTCGC CGTGCTGCTT
CTCGGTCCGC TGCCCGCCGG TCATCCGGAT GCCACCCGGC GGGGGGACTG GCTCGTGCTC
GGGCTGCTGC TGGTCGCCCT CGCCGGCCTG GTCACCACCC GCTCGGCGCT CGCGGCGGTC
GCGCTGACCG GCGCGGTCGG CCTGATCCTG GCAGCCTGGT TCCTCACCAC GGGCGCACCG
GACGTGGCGC TCACCCTGAT GCTGGTCGAG GTGCTCACCA CGGTGGTGGT CATGCTGGCC
CTACGGGGTC GGCCCGGCCG GCTGGTCGCG CCGGGCCGTC GGGCGGGGAT CGTTGCCGGT
GCCGGCCTGG CGGTACTCGC CGGGCTGGCG GCGATGGCGG CGACGGCGGT GTTGACCGGT
CGTCGCGACC TGTCGCCCGC CGGCGACTGG TACCTGCGGG AGGCGTCCTC GGCCACCGGT
GGGGAAAACC TGGTCAACAC CATCCTCGTC GATTTCCGGG CCCTGGACAC CCTCGGTGAG
GCCGTCGTGC TCGCGGTGGT CGCGGTCGGG CTGATCGGGC TCGCCCGACC GGACGACGCT
GTACGGCGTC GTCCCGACGC CGTACGGCAC TCCGTTGATC CGGTGCTCGA GCTGGCATAC
CGCGTACTGG CTCCGGTCAT GCTTGCCGCG TCCGCGGTGT TGTTCCTCCG TGGCCACCAG
GAGCTCGGGG GCGGGTTTAT CGCTGCGCTG CTCGCCGGTA CCGCGGTCGG ACTCGGCCAT
CTGGCGCACC CCGCGGGAGC GCCGCTGCTG GGCCGCCTCC GCGGAGCGCC GCTGCTCACC
GTCGGCCTGC TCCTGGCGCT CGTCGCGGGC TTTGCTCCGC TGGCCGTGGG CAGAGTCTTC
CTGACCCCGG TCAAGCTCAC CCTGCCCGGC GTCGGATCGG TGTCGTCGGC TCTCCTGTTC
GACCTGGGTG TGTACCTGAT GGTTCTGGCC CTGGTCGTGG CGGCGGTCCG TCGGTTGGAC
AGCGCGCCCG CTGGCCCTGC ACCCGGTCCG ATTCGGGAGC AGGCCCAATG A
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| Protein sequence | MILAVVLGGQ FLLAAVAPVL TWWLGRNAGY ALAVGYLVGA GLLFSQRPLL LADQAVTLSW
PWLPSLGVFA ELRMDALSLI FALLVLAVGA FVMAYCPRYL SPDSRHTRVY VTMTLFAAAM
LGLVLADDLL LLFVFWELSS ILSFVLIGQG GRPQARGPAI QALFVTTTGG VALLVAVVVL
SASLGTSDLD EILADPGRLA TGPAWAAGAL VIFAAITKSA QVPFHFWLPG AMVALTPVSA
YLHAATLVKA GIYLLMRFSA LFGGQWPWDL TLIGLGLITA VVGALLALRQ HDLKALLAYS
TVSQLGLLVS VIGVGTPASD AAAILYTIAH ALFKATLFML VGIIDRQAGS RDIRALTGLW
RAMPITVTLT VLAAMSLAGL PPTIGFVGKE AIFEALTTVH ELPWLGWVAA GLAVLAAALT
FAYAARLVHG VLSGPIRQRE LHEPAWSFLA PAAVAAVLAT ALGPAVAVLS PMVERAASDA
RPQGQPPYLA FWHGFTPALG LSALTVLLGM LLFWYRRRTD PVLAAIPTTS PFTGYLERWR
RALLRIGAFV ARPAQVTAPA PYLARPLLAV VALAAVAVLL LGPLPAGHPD ATRRGDWLVL
GLLLVALAGL VTTRSALAAV ALTGAVGLIL AAWFLTTGAP DVALTLMLVE VLTTVVVMLA
LRGRPGRLVA PGRRAGIVAG AGLAVLAGLA AMAATAVLTG RRDLSPAGDW YLREASSATG
GENLVNTILV DFRALDTLGE AVVLAVVAVG LIGLARPDDA VRRRPDAVRH SVDPVLELAY
RVLAPVMLAA SAVLFLRGHQ ELGGGFIAAL LAGTAVGLGH LAHPAGAPLL GRLRGAPLLT
VGLLLALVAG FAPLAVGRVF LTPVKLTLPG VGSVSSALLF DLGVYLMVLA LVVAAVRRLD
SAPAGPAPGP IREQAQ
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