| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3209 |
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| Symbol | |
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| ID | 5059674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3675767 |
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| End bp | 3676513 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640475457 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001160021 |
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| Protein GI | 145595724 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.300108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAACA CCCCCGCCAC GGCACCGACC AATCGGAACG CCGAGCTCGC AGCTGGCCTT
GCCCGAGTCC GTACCCGAAT CGCCGACGCC TGTGCGGCGG CCGGTCGGGA TCCCGGGGAG
GTGACCATGA TCGCGGTGAC CAAGACGTAC CCGGCGAGTG ACGTTGTCGC CCTGATCGGG
CTCGGGGCCA CTGAGGTGGG GGAGAACCGG GACCAGGAGG CCGCGGCGAA GGCGGCCGAG
GTGGCGGCGG CGGGGGTGAC GCCCCGGTGG CACTTCATCG GCCAACTCCA GCGGAACAAG
GCGAAGTCGG TGGTCCGGTA CGCCGATGTC GTGCACTCGG TGGACAGTGT CCGGTTGGCC
CGGGCGCTGG ATCGGGCTGC GGGAGCGGAA CGGGACCGGC CGTTGGATGT GCTCCTTCAG
GTCAGCATCG ACGGGGCGGT GGGTCGCGGT GGTGCGTTGC CCGGCTCCGC CGACCCGGAT
GCGGGGCTCG ATCCGCTGGC CGAGGTGGTG GCCGGTGTGG ACGGGCTGCG GCTTACCGGT
TTGATGGCGG TGGCACCGCT GGGGTGGGAG CCGGACCGGG CGTTTGCCCG GCTGGCGGAG
GTGGCGGCCG GGTTCCGGGT CCAGCATCCG CAGGCGACGT TGTTGTCGGC GGGCATGAGC
GGGGATCTGG AACCAGCGGT CCGGTACGGC GCGACACATG TCCGGGTGGG CAGCGCGTTA
CTCGGAATGC GCCCCACGCT GCGGTAG
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| Protein sequence | MTNTPATAPT NRNAELAAGL ARVRTRIADA CAAAGRDPGE VTMIAVTKTY PASDVVALIG
LGATEVGENR DQEAAAKAAE VAAAGVTPRW HFIGQLQRNK AKSVVRYADV VHSVDSVRLA
RALDRAAGAE RDRPLDVLLQ VSIDGAVGRG GALPGSADPD AGLDPLAEVV AGVDGLRLTG
LMAVAPLGWE PDRAFARLAE VAAGFRVQHP QATLLSAGMS GDLEPAVRYG ATHVRVGSAL
LGMRPTLR
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