| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3203 |
|---|
| Symbol | |
|---|
| ID | 5059668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3671760 |
|---|
| End bp | 3672179 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640475451 |
|---|
| Product | zinc finger, DksA/TraR C4-type |
|---|
| Protein accession | YP_001160015 |
|---|
| Protein GI | 145595718 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1734] DnaK suppressor protein |
|---|
| TIGRFAM ID | [TIGR02419] phage/conjugal plasmid C-4 type zinc finger protein, TraR family
[TIGR02420] RNA polymerase-binding protein DksA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGC CAGCCGACAC GAGGACCGCC GGCCGTAAGC CGGCGACCAA GTCCACCCGC
AGCGCGGCGG AGACCGAGAA GATCCGGGCA GCCCTGGCAG CACGGCGGGA CGAGCTTCGC
GCCGAGTATG ATCAGACGTT GAGCGAGATC ACCGAGCTGC AGCGCGACCG GCTGACCGAC
TCGGCCGGGG ACGACCAGGC CGACACCGGC ACCAAGACGT TCGAGCGAGA GCAGGAGATC
TCCCTCGCGA ACAGCATCCT GGAACGGATC ACGCAGGTCG AGCGGGCACT GGAGCGGCTC
GATGAGGGTG GCTACGGCTG GTGTGAACGG TGCGGCAACC CGATCCCGGT GGAGCGGCTG
GCTGCCTTCC CGTCGGCGAC CCTCTGTGTG ACCTGTAAGC AGCTGGCGGA GCGGCGCTGA
|
|---|
| Protein sequence | MAKPADTRTA GRKPATKSTR SAAETEKIRA ALAARRDELR AEYDQTLSEI TELQRDRLTD
SAGDDQADTG TKTFEREQEI SLANSILERI TQVERALERL DEGGYGWCER CGNPIPVERL
AAFPSATLCV TCKQLAERR
|
|---|
| |