Gene Strop_3182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3182 
Symbol 
ID5059647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3653361 
End bp3653990 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content73% 
IMG OID640475430 
Producthypothetical protein 
Protein accessionYP_001159994 
Protein GI145595697 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083
[TIGR03085] conserved hypothetical protein TIGR03085 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.429032 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAGT ACGCCCGGTC GGAGCGGGAG ACGCTCGTCG ACCTTATGCA GACGTTGGGA 
CCGGAGGCAC CAACACTCAA CACGGGTTGG ACCACCCGGG ATCTCGCCGC CCACCTGGTG
CTGCGAGAAC GCCGCCCGGA CGCCGCTGGC GGGATCCTGC TGCCGCCGCT GCGCGAGTAC
GCCGAGCGGG TCCGTCGACA ACTCGCCGCC CGCCCCTGGG AGAGCCTGGT TGACCAGGTA
CGTCGGCCGC CGGTGTGGAG CCCGATCAGC AATCCGCTGC TCGACGAGGC GGCCAACACG
ATGGAGTTCT TCATCCATCA CGAGGACGTT CGCCGGGCAC AGGCCGACTG GCAGCCCCGC
GACCTGCCGG CGGGGCTGCA ACAGGCGCTG TGGCGCCGGG CGGCGGCGCT GGCCCGGATG
GCGCTGCGCC GTTTCCCGGC CGAGGTGCTG GTCCAAGCCC CGGGGTACGG GCAGCGATCG
GCCGGTCGGG GCGACGAGCA GCTCCGGATG GTGGGTGCGC CCAGCGAGCT GGTGCTCTTC
CTAAGCGGGC GACAACGGGC GGCGCGGGTG CAGATCGACG GCCCGCCGGG ACTGGCCGAC
CGGCTGCGCG ACGCCCGGTT GGGGCTGTGA
 
Protein sequence
MPQYARSERE TLVDLMQTLG PEAPTLNTGW TTRDLAAHLV LRERRPDAAG GILLPPLREY 
AERVRRQLAA RPWESLVDQV RRPPVWSPIS NPLLDEAANT MEFFIHHEDV RRAQADWQPR
DLPAGLQQAL WRRAAALARM ALRRFPAEVL VQAPGYGQRS AGRGDEQLRM VGAPSELVLF
LSGRQRAARV QIDGPPGLAD RLRDARLGL