Gene Strop_3157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3157 
Symbol 
ID5059622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3623179 
End bp3624300 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content66% 
IMG OID640475405 
Producthypothetical protein 
Protein accessionYP_001159969 
Protein GI145595672 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.718315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.080776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACG ACCGCCTCCG GCTCGACCTC GCCGATCTGG CGGAAGAGGT CAACACTGCC 
GACCTGCACG ACCGGGTTTT GCACACCTCC CGTCGGCTCG TCATCCAGCG CGCGATCGTC
ACGTCCGCCG CTGTCCTCGC GCTGTTCGGC GCGACCGGCA CGGCCCTCGC CGTGATTCCC
CGTGCCGACG GTCCGGCGCC GCTGCCAGCC GACTCTCCGT CGGTCACTGT TTCCCCATCG
CCGCCGGCCG ACCCGTCCCC GTCTCCGTCT CTGTCCTCGT CGCCCCCAGC CGAGCAACCA
GGGCTTCCCG GTACCCGTTA CTACCTGAGT TTTGGCGACG AGGCCACCGT TCACGCCGTG
CAGGGCGACG CCCACAACGT GGTTACCCGC TTCCCGCTCT CGGACGATGA CCTGTGCCCC
GGGAACACCC TCACCGTCTC CCCGGACGGC AGGTGGGTGG CCTATGTCAA GGGCAGCAGC
ACGGATCGTC ACAGTGGAGA ACTGCTGGTG GGTGCTCTGG GGGAGCCGGG AGAAAGGCCG
GTGATGACGA GCGTGCTGAG TGATGTCAAC TGCCTCGGCT CTCGGGCCCT GCTGTGGAAC
GGCAATGATC TGCTGGGAGT GCGGCTGGCG GATACGCGAT TTGTGCTCCT GGATGTGGCC
GCCAAGGAGC CGGTGGCCGG CAGCCCTCGG ATGGAGAACG TGGAAGGTTG GTCCGCCGAC
GGGAGGTGGC TGGCTGCGCA AGAGGATGGC ACGCGGTATG TGACGGATGG GCAGCAGGTA
CGGAAGTACG ACTACACTCC GCCTGCCGAT GAAGCGCTGA AGTGGGACGG CTGGGCCGTT
CGAAGCATAT CGACGGATGG TCGATACGTC GCGGTCGGCT GGCATGGCAC CGATCCGTCG
CGCCAAGATG ACAGCTTTGA TGTCGTCGAC ACCACCACGG GCGCGACAGT GCCGCTGCCA
GGTGAGGGAG AGATCCGAAG CATCCTGTTT ACCGCTGACG ACAAGGTGCT GGTTCGGCGG
GCGAACGGTA TCAGTGTGCT CGACAGCTCC TTCGAGCCCC TCGCCACCGT CGTCGAACCC
GTCGAGTTCC AACGCCTGGA CTTGCTGGCA TACCGGGTCT GA
 
Protein sequence
MKHDRLRLDL ADLAEEVNTA DLHDRVLHTS RRLVIQRAIV TSAAVLALFG ATGTALAVIP 
RADGPAPLPA DSPSVTVSPS PPADPSPSPS LSSSPPAEQP GLPGTRYYLS FGDEATVHAV
QGDAHNVVTR FPLSDDDLCP GNTLTVSPDG RWVAYVKGSS TDRHSGELLV GALGEPGERP
VMTSVLSDVN CLGSRALLWN GNDLLGVRLA DTRFVLLDVA AKEPVAGSPR MENVEGWSAD
GRWLAAQEDG TRYVTDGQQV RKYDYTPPAD EALKWDGWAV RSISTDGRYV AVGWHGTDPS
RQDDSFDVVD TTTGATVPLP GEGEIRSILF TADDKVLVRR ANGISVLDSS FEPLATVVEP
VEFQRLDLLA YRV