| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3118 |
|---|
| Symbol | |
|---|
| ID | 5059582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3575645 |
|---|
| End bp | 3576205 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640475366 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001159931 |
|---|
| Protein GI | 145595634 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.276552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.253393 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAG TTGATGAAAG GACGTGGTAC GGCATGCGCG TCGTATCGAA AATGTTTGTG
GCTGGAACGA TCGGTGTAGC TCTGGCGGGC GTGGCGTCGG TGGGCGTCGC TATCGCCGCA
ACCGAGGATA TGCCAACCGA GAGCAACGGC GGCTCAATCG TGGAGGACTT CAGCTACCCG
GGAGCAGCTG CCATTCTGGC TGAGCACAAC GTGGAACTTA TCTCCGGCGA CGGTCACATC
GTGTTCGCCG ACTGCAACAC ACCTCCAGTG AACGACATCG GTGTGATCGA GGTGTGGACC
TCGGAACTTA GCCAGGCGAG AGTTTGCTTC AAAGCCCTCG GGCCGGTCGG TCGGCTGGAT
CTCCGGATAC CTGCGGTCTT CGAGATTTTC GGCGACGGCC AACGGGCCGG GACCGGCCAC
AATGGTACCG CAACGGTGAT TACAGAAAGT GGAGAAGAAA CCACGAAGGA CCTCATCCCC
GACGGTAGTA CCCAGTTCGG CCAAGGTAGT GGGCCTGGCA ATGAACCCAC CACTTTGCTG
CAGCTGACCG TCAAGCCCTG A
|
|---|
| Protein sequence | MAAVDERTWY GMRVVSKMFV AGTIGVALAG VASVGVAIAA TEDMPTESNG GSIVEDFSYP
GAAAILAEHN VELISGDGHI VFADCNTPPV NDIGVIEVWT SELSQARVCF KALGPVGRLD
LRIPAVFEIF GDGQRAGTGH NGTATVITES GEETTKDLIP DGSTQFGQGS GPGNEPTTLL
QLTVKP
|
|---|
| |