Gene Strop_3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3113 
Symbol 
ID5059577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3567603 
End bp3568319 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content75% 
IMG OID640475362 
Productmycothiol-dependent maleylpyruvate isomerase 
Protein accessionYP_001159927 
Protein GI145595630 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.322619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCG ATCCACTGCG GCTGACGGGC GAGGTAGACG ATGCCACGGC CCGTCTCCTG 
CGCACCACGG CCGACCTCGA CGAGACGAGC ATCGCCGCCG CCTCCCTGCT TCCCGGTTGG
ACCCGGGGGC ACGTGTTGGC CCACCTCGCC CGGAACGCCG ACGGATTCGT CAACCTGCTC
ACCGCCGCCC GTACCGGGGA CCCCATCCCG ATGTACGCGA GCCCGGCCGC CCGTACTGCG
GACATCGAGG CCGGCGCCGC CCGCCCACCC GCCGCCCACC GGGACGACCT GCGACGCACC
GCGGATCGGT TCGCCGAGGC GGTGGCGGCG ATGCCCGCCG AGGCGTGGGG TGCCACCGTC
GACACCCGGC GCGGGCCGTG CCCCGCGGCG AGCCTCGTCT GGGGACGGCT GCGGGAAATC
GAGGTGCACC ACGTAGACCT GGCCATCGGC TACCAGCCCG CCGACTGGCC GGAGGCGTTC
GGCCACCGGC TCCTGCGTGA GGTCGCCACC GGCCTGGTCG GTCGCTCCGA CGCGCCGCCG
ATGGTGCTGC GCTGCGACGG CATGGGCCAC GAACTGGTGG TCGGCGACCG TACCGCCGCC
CCGACGGTGA GCGGCACCGC GCCCGACCTC GCCGCCTGGC TGATCGGCCG CAGCCCCGGG
ACCCTGCTCA CCGTCGCCCC CGACGGCCCC CTACCGAACC CACCCGGATG GATCTGA
 
Protein sequence
MTSDPLRLTG EVDDATARLL RTTADLDETS IAAASLLPGW TRGHVLAHLA RNADGFVNLL 
TAARTGDPIP MYASPAARTA DIEAGAARPP AAHRDDLRRT ADRFAEAVAA MPAEAWGATV
DTRRGPCPAA SLVWGRLREI EVHHVDLAIG YQPADWPEAF GHRLLREVAT GLVGRSDAPP
MVLRCDGMGH ELVVGDRTAA PTVSGTAPDL AAWLIGRSPG TLLTVAPDGP LPNPPGWI