Gene Strop_3099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3099 
Symbol 
ID5059563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3551857 
End bp3552837 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content73% 
IMG OID640475349 
Producthypothetical protein 
Protein accessionYP_001159914 
Protein GI145595617 
COG category[S] Function unknown 
COG ID[COG1481] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00647] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.170943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.19323 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATGA CGGCGGCGGT CAAGGACGAG CTGAGCCGGG TGGACGTGCC CAAGCCCTGC 
TGCCGGCGGG CGGAGATGGC GGCGCTGCTG CGCTTCGCCG GCGGGTTGCA CATCGTCTCC
GGTCGGGTGG TCGTGGAGGC CGAACTGGAC ACCGGGGCGG TGGCCCGACG GCTGCGGCGT
GAGATCGCCG AGGTCTACGG CTACCCCAGC GAGATCCACG TCCTCGCCTC CGGTGGGCTA
CGCAAGGGCA GCCACTTCAT CGTGCGGGTG GTCAAGGACG GCGAGTTCCT CGCCCGGCAG
ACCGGCCTGC TCGATGTCCG CGGTCGTCCG GTGCGGGGCC TGCCACCGCA CGTGGTGGCC
GCCAACGTCT GCTGCGCGGT CTCGGCGTGG CGCGGCGCGT TCATGGCACA CGGCTCGCTG
ACTGAGCCGG GTCGTTCCAG TGCGATGGAG ATCACCTGCC CCGGCCCGGA GTCGGCACTT
GCCCTGGTCG GCGCGGCCCG CCGGATCGGC ATCGCCGCGA AGAACCGCGA GGTGCGCGGC
GTGGACCGGG TGGTCGTCAA GGACGGTGAC GCCATCGCCG CCCTGCTCAC CCGGATCGGT
GCCCACGCCA GCGTGCTGGC CTGGGAGGAA CGTCGGGTCC GGCGTGAGGT GCGGGCCACC
GCGAACCGGC TGGCGAACTT CGACGACGCG AACCTGCGTC GGTCGGCGCG CGCCGCGGTC
GCCGCCGCCG CCCGGGTCAC CCGTGCCCTG GAGATCCTCG CCGACGACGC GCCGCACCAC
CTGACCTCGG CCGGGCGGCT GCGGCTGGAG CATCGCCAGG CATCGCTGGA GGAGCTGGGC
GCGCTCGCCG ACCCGCCGTT GACCAAGGAT GCGATCGCCG GGCGGATCCG GCGGCTGCTC
GCACTCGCCG ACAAGCGGGC CCGCGATCTC GGCATCCCGG ATACCGAAGC GGCAGTCACG
CCGGACATGC TCGTGGTCTG A
 
Protein sequence
MAMTAAVKDE LSRVDVPKPC CRRAEMAALL RFAGGLHIVS GRVVVEAELD TGAVARRLRR 
EIAEVYGYPS EIHVLASGGL RKGSHFIVRV VKDGEFLARQ TGLLDVRGRP VRGLPPHVVA
ANVCCAVSAW RGAFMAHGSL TEPGRSSAME ITCPGPESAL ALVGAARRIG IAAKNREVRG
VDRVVVKDGD AIAALLTRIG AHASVLAWEE RRVRREVRAT ANRLANFDDA NLRRSARAAV
AAAARVTRAL EILADDAPHH LTSAGRLRLE HRQASLEELG ALADPPLTKD AIAGRIRRLL
ALADKRARDL GIPDTEAAVT PDMLVV