Gene Strop_3067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3067 
Symbol 
ID5059531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3519229 
End bp3520137 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content70% 
IMG OID640475317 
Producthypothetical protein 
Protein accessionYP_001159882 
Protein GI145595585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.124332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTCC TCGCCGTCCC CAGCAACACC TGGGGCATTC CCGGCCCGGT ATTCCTCGGG 
CTATACCTGG TGACCGCCGC TGTTCTCGTC ACCATCGCAC TGCTACGTCG AAACGAGATA
CTGAACGGAT CGACGTACGA CGCGAACCTG CTCAGCCCTC AGCAGGTCGC CTACCTCAGC
GGTGGTACGC CGCTGGTCGT CTGGACCTCT CTCGCGGGGC TCCGCAACGC TGGTGCGGTC
AATGTGGACC CGGATCGACG GTTGGCCGTC AGCGACTCGC TGCCCATCGG CAGCGCCCCG
TTGGACCAGG CCATCCACCT CGCCGCCGGC CGGGGCCTAC GCGCCCAGGA GCTCAGCGGG
GACCAAGAAG TGCGACAGGC CGTCCACCAA CTCCGCGTCG ACCTGGAGCA ACACGGCCTG
GCGCTGTCCA CCGAACAGCG GGCCGCCCTA CGCAACGCGG TACTGCCACT CACCATCCTG
CTCGCAGTCG GCACGCTGCG GCTCGGGGCC GGTCTGGCGA ACGAACGTCC CGTCGGCTGG
CTCTTCCTGA CCCAAATCGC GCTGCTGGTC GTGACAATTC TGCTCTTCCG GCGTCCATGG
CGCACCCGCA CCGCCGACCG GGTTCTACGC CGGCTACGCC ACCGGCACAA CCACCTGGCA
CCTCGCCACA ATCCGGCCTA TGCCACCTAC GGCGCCGCCG GGGCCGCGAT GGGCGTCGCC
CTCTATGGCA CGGCCGCCCT GTGGGCCATG GATCCCGGCT TCGCCGAGCA GGCGCAGATC
CAGCAGCAGT CCCTGGCCGG TGGGTCGGCA GCCGGCGGGG GCGGGACCGC CGGCGCAGGT
GACGGCGGTG GCGGTGACAG CGGTGGCGGT GGCGGCGGGT GTGGCGGCGG CGGTGGGTGC
GGAGGATGA
 
Protein sequence
MILLAVPSNT WGIPGPVFLG LYLVTAAVLV TIALLRRNEI LNGSTYDANL LSPQQVAYLS 
GGTPLVVWTS LAGLRNAGAV NVDPDRRLAV SDSLPIGSAP LDQAIHLAAG RGLRAQELSG
DQEVRQAVHQ LRVDLEQHGL ALSTEQRAAL RNAVLPLTIL LAVGTLRLGA GLANERPVGW
LFLTQIALLV VTILLFRRPW RTRTADRVLR RLRHRHNHLA PRHNPAYATY GAAGAAMGVA
LYGTAALWAM DPGFAEQAQI QQQSLAGGSA AGGGGTAGAG DGGGGDSGGG GGGCGGGGGC
GG