| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3022 |
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| Symbol | |
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| ID | 5059486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3454136 |
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| End bp | 3454915 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475272 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001159837 |
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| Protein GI | 145595540 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01457] HAD-superfamily subfamily IIA hydrolase, TIGR01457
[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.446988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.662219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATC GTAAGCCTGT CCAGAGTTGG CTCACCGACA TGGACGGGGT GCTGGTGCAC
GAGGGGCAGC CGGTGCCCGG CGCGCCGGAG TTCATCGCCC GGCTGCGCTC CTCCGGCAGG
CCGTTCCTGG TGCTGACCAA CAACTCCATC TACACTCCGC GCGACCTACA GGCCCGGTTG
GTTCGGATGG GGCTGGACGT GCCGGAGTCC GCGATCTGGT CGTCGGCGTT GGCGACCGCC
CAGTTCCTGG CCGATCAGCG GCCGGGCGGC ACCGCGTACG TGATCGGGGA GGCCGGGCTG
ACCACGGCGC TGCACGCGGT CGGCTACGTG CTCAGCGACT TCGCGCCCGA CTACGTGGTG
TTGGGGGAGA CCCGTACCTA CAGCTTCGAG GCGATCACCA GGGCGATCCG GCTGATCAAC
GACGGAGCCC GCTTCATCTG CACGAACCCC GACGTGACCG GCCCGTCGAT GGAGGGCGCG
CTGCCCGCCG CCGGTTCGGT CGCCGCGATG GTGTCGAAGG CGACGGGCGT GGAGCCGTAC
TTCGTCGGGA AGCCGAACCC GATGATGATG CGGTCGGCGT TGAACACGAT CGACGCGCAC
TCGGAGTCGA CGGCGATGAT CGGCGATCGG ATGGATACCG ACATCCTCTG CGGGCTGGAG
GCGGGGTTGG AGACCATCCT GGTGCTCACC GGCATCAGCA GCCGGACGGA GGCCGAGCGC
TACCCGTACC GGCCGTCACG GATCGTCGGC TCGGTGGCCG ACCTGATCGA CGAGATCTGA
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| Protein sequence | MNDRKPVQSW LTDMDGVLVH EGQPVPGAPE FIARLRSSGR PFLVLTNNSI YTPRDLQARL
VRMGLDVPES AIWSSALATA QFLADQRPGG TAYVIGEAGL TTALHAVGYV LSDFAPDYVV
LGETRTYSFE AITRAIRLIN DGARFICTNP DVTGPSMEGA LPAAGSVAAM VSKATGVEPY
FVGKPNPMMM RSALNTIDAH SESTAMIGDR MDTDILCGLE AGLETILVLT GISSRTEAER
YPYRPSRIVG SVADLIDEI
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