| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2962 |
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| Symbol | |
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| ID | 5059426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3389465 |
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| End bp | 3390853 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475213 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001159778 |
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| Protein GI | 145595481 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTTCC GCCCGCGCCT TCCTCGGCTG CCGGGCCGCG GCGTCGGGTC GGTGGGGGGT
GGCGGGCGGC CGCGGCGCAG GCTGACGTTG GTCGCGGCCG CCGCGTGTAT CTTCCTGATG
CAGTTGGATT TCTATGCGTT GAATCTGGCG TTGCCGTCGA TGGCGGCGGA GTTCGGTTCC
TCCACCACGG ATCTACAGTG GGTGATCAGC GGCTACATCC TGGCCCAGGC GGCGTTTCTC
ATCCCGGGTG GCAAACTCGG TGACATCCTT GGTCGTCGGC GCATGCTTGT CGTGGGTTTG
GTGATTTTCG GGGTGGGGTC GCTTGGTGCG GGTCTGGGCT CCGATCCGCC GATCGTGATT
GCCTTTCGGG TTGTGCAGGG AATGGGATCC GGGATCGTGT ATCCGCTTGC CTTCGCGGTG
ATTACCGAGG CGTTCCCGGG GCGGCAGGCG AAGCGGGCGA TCGGTAACGC GTACGGCATC
GGGGCGGTGG CGCTGGCGAT GGGGCCGTTG CTCGGTGGCG GGGTAACGGA GCTGATCAGC
TGGCGAAGCG TGCTCCTGGT GAACGTGCCG TTCTGCCTTG TGGCGATCGT GGCCGCCCTC
GCCTGGCTTC CGGAGTCGCG TGACCCCACG GTGTCGCGCC GGATCGACCT GGCGGGTCTG
GTCGTGGTGG TGCTGGGGAT TGTGGCGATC ACCGTGGCGG CGGACCGGAT GAATGCCTGG
CGACCGGTGG TGGCCGCTGC CCTCGCTGTC GGTGGGCTGG TGCTGCTGGC CGCGTTCGTG
CTTCGGGAGC GGGTGGCCGA GAGTCCACTG GTCCGGCTGG ATCTATTCAG AAACGCCAAG
TTCGTGGTGG TGACTCTGAT GGGGATGGTC GCCTACGTCG CCTTCGTGGT CACGATCTTC
GCCACGACAA TCCATCTACA ACAGGTTCGG GGCTACTCGC CCTTCGTCGC GGGCCTGGCG
GTCCTCGCCG CCTCGGTCGG CGGCGGCGTG GCCGATCCGT TCGCGGGTCG GCTCAGCCAA
CGGGTCGCGG TGCGTCGGTT GATCGCCGCC GCCATCCTGA TCGGCGCGGT CGGATTGGTC
GTGGTGGCCT TTGGCGGGCA GATCGGGCCG TATCTGCTCG GTCTGGCGGT CGCCGGGTTT
GGCTACCAGA TTGGGTCCAC CCTGACCAAC CTGGGCACGC AGGCCATGGT CCCGGCCGAG
CGGGCCGGCG AGGCATCCGG AGTGACGTTC ACGATCCTCT CCGCCGGCTC GGGTGTCGCG
GTCGCGGCGG CCGGCACGCT GATCGAGCAG GGCGACCTCG CCGCGGGCAT CATGCGGGTT
CTCCTGGGAG TAGCGGCCAG CAGTGCGGTG GCCACGATGT TGCTGGCCCG GGTGCCCCGA
TTCACCTGA
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| Protein sequence | MSFRPRLPRL PGRGVGSVGG GGRPRRRLTL VAAAACIFLM QLDFYALNLA LPSMAAEFGS
STTDLQWVIS GYILAQAAFL IPGGKLGDIL GRRRMLVVGL VIFGVGSLGA GLGSDPPIVI
AFRVVQGMGS GIVYPLAFAV ITEAFPGRQA KRAIGNAYGI GAVALAMGPL LGGGVTELIS
WRSVLLVNVP FCLVAIVAAL AWLPESRDPT VSRRIDLAGL VVVVLGIVAI TVAADRMNAW
RPVVAAALAV GGLVLLAAFV LRERVAESPL VRLDLFRNAK FVVVTLMGMV AYVAFVVTIF
ATTIHLQQVR GYSPFVAGLA VLAASVGGGV ADPFAGRLSQ RVAVRRLIAA AILIGAVGLV
VVAFGGQIGP YLLGLAVAGF GYQIGSTLTN LGTQAMVPAE RAGEASGVTF TILSAGSGVA
VAAAGTLIEQ GDLAAGIMRV LLGVAASSAV ATMLLARVPR FT
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