| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2956 |
|---|
| Symbol | |
|---|
| ID | 5059420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3378709 |
|---|
| End bp | 3379428 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640475207 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001159772 |
|---|
| Protein GI | 145595475 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.286801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCAGCA CTTCGGAGCA CCAGACGCCG ACACCGGAGC CGGAGTCCCT CACCGACCTA
CTCGGCGGGC GACGTGGCGC GATCGACGCC ACCGTGCCGC CGGTGGCGTT CGCGGCCGGC
TGGCTCCTCG GCGGCGAGTC GCTACCGATC GGGGTCGGCG CGGCGCTGGT GACCGGCGCG
GCGGTGGCGG GATGGCGATG GCGTCGTGGG CATCGCCCAC GGTCGGTGCT GGTGGGCCTG
CTCGCCGTCT GCGTCGGCGC GCTGATCGCG CTTCGGACCG GACGAGCCGA GGACTTCTTC
CTGGTGCAAC TCGTCGCGAA CGCCGCGAGC GCGCTCGCCT GGATGGTCAG CATCGTGATC
CGCTGGCCAT TGCTGGGAGT GGTCGTCGGC GCCGTGTTGC GACAGCGGAC CCGGTGGCGC
CGGGACCCGG CGCTACTGCG GGCGTACAGG CTCGGCAGTT GGGTCTGGAC CGCCAGCTTC
CTGCTCCGGG TAGCGGTCTT CCTGCCGTTG TGGCTCGGCG GCCAGGTGGT CGCGTTGAGC
GTGGCCCGGG TAGCGCTGAG CTGGCCGTTG GTAGCCGCCG TCCTCGGCGT GAGCTGGGTG
GTGGTGCGCC GTTCACTGCC GGCCGACCAT CCGGGGCTAC GGCATCCGGT GCTGCCGGGT
GAGACATCGG CGCAGGCCGT GCAGGTGCCA CAGCGCGATT CGGCGGGCAG CCCAGGTTAA
|
|---|
| Protein sequence | MGSTSEHQTP TPEPESLTDL LGGRRGAIDA TVPPVAFAAG WLLGGESLPI GVGAALVTGA
AVAGWRWRRG HRPRSVLVGL LAVCVGALIA LRTGRAEDFF LVQLVANAAS ALAWMVSIVI
RWPLLGVVVG AVLRQRTRWR RDPALLRAYR LGSWVWTASF LLRVAVFLPL WLGGQVVALS
VARVALSWPL VAAVLGVSWV VVRRSLPADH PGLRHPVLPG ETSAQAVQVP QRDSAGSPG
|
|---|
| |