| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2943 |
|---|
| Symbol | |
|---|
| ID | 5059407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3365125 |
|---|
| End bp | 3366054 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640475194 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001159759 |
|---|
| Protein GI | 145595462 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4188] Predicted dienelactone hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.000846327 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAACG GCGACGTAGC GGCAGGAACA CCCTCCCCGA TCGTCTCGGT CAGTCCGGTG
ACCCTGCCGG CCGCGGACCG TGGCGAGGAC CTGAGGATGC GGGTCTCGGC CCCCGTGACT
GGACGCGAAC TACCAATCCT CATCTTCTCG CACGGCTTCG GCAAGTCGAT GCAGGCATAC
GCCCCGCTGG TCGACTACTG GGCAGCCCAC GGCTTCGTGG TGGCCCAGCC CACCCACCTC
GACTCCCGCA CACTGAACAT CACGCCCGAT GATCCCCGGC ACCCGGAGAT TTGGCGCTTC
CGTGTCGCCG ACCTGAAACG CACTCTCGAC CACCTCGACG TCATCGAGGC CGCCGTTCCC
GGTCTCGAAG GACGACTTGA CCGTGGCCGG GTCGCCGCGG TCGGACACTC CTGGGGCGGG
CAGACGGTGA GCATGCTGCT GGGCGCACGG GTCCTCGGAG CTGATGGTGT CCCCGGCGAG
GACCTGGCGG ACTCCCGGAT CACCGCCGGC GTGCTGCTCT CCACCACCGG CACCGGCGGG
GCCGACCTGA GTCCTTTCGC GGCCGAACAC TTTCCCTTCA TGAGCCCGAG CTTCACGGAG
ATGACAACGC CGGCTCTCGT GGTCGCGGGC GACAAGGACC AGTCGCCGCT CTCCGTGCGC
GGACCGGACT GGTTCACCGA TCCGTACCAC CTGAGCCCTG GCCCCAAGAG CCTGCTCACC
CTGTACGGGG CGGAGCACTC CCTGGGTGGA GTCGCCGGCT ACACCGTCAC GGAAACGACC
GACGAGAGTC CCGAACGAGT CGCCCTCATC CAGCGAATCA CCGTGGCCTA CCTGCGAAGC
GCGCTCTATC CCGGTGACGA CACGTGGGCG ACGGTGCGTG CCGCGCTGAG GGATGACATC
GATCGTCTGG GGCGGATCTC GGTCAGGTGA
|
|---|
| Protein sequence | MFNGDVAAGT PSPIVSVSPV TLPAADRGED LRMRVSAPVT GRELPILIFS HGFGKSMQAY
APLVDYWAAH GFVVAQPTHL DSRTLNITPD DPRHPEIWRF RVADLKRTLD HLDVIEAAVP
GLEGRLDRGR VAAVGHSWGG QTVSMLLGAR VLGADGVPGE DLADSRITAG VLLSTTGTGG
ADLSPFAAEH FPFMSPSFTE MTTPALVVAG DKDQSPLSVR GPDWFTDPYH LSPGPKSLLT
LYGAEHSLGG VAGYTVTETT DESPERVALI QRITVAYLRS ALYPGDDTWA TVRAALRDDI
DRLGRISVR
|
|---|
| |