| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2823 |
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| Symbol | |
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| ID | 5059286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3237729 |
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| End bp | 3239423 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475076 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001159642 |
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| Protein GI | 145595345 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACG ACACCCGAAC GCCATCCAGT GCCGAGACCG GCACGGTGCA GGCGCCCGCG
CCGGCACCGC CCGACGAGTT CGTCCCACCG ATCACCGGAC GTAAGCGCAC CCTCGCGCTC
GTCGTGGTGC TCACCGGATT CGTGCTGGAC CTGCTCGACA TCACCATCGT CAACGTCGCG
CTGCCGTCGA TCCGCGACGG CATCGACGCG ACGGCCGCCA CGATGCAGTG GCTGGTGGCC
GGCTACGCCC TCGCATTCGC CTCAATGCTG ATCATTTCCG GTCGGCTCGG CGACATCGTC
GGCGTCCGTC GGATGTTCCT CATCGGCGTC GCCGGGTTCA CCCTCACCTC GCTGCTGGCC
GGCCTCGCCC AGACCCCCGA ACAGCTGATC GTCCTCCGGT TCGTGCAGGG CGCGATGGGC
GCGATAATGG TGCCGCAGGT CTACACCCTC ATCCAGCTCC TCTACGCGCC CAAGGAGCGC
GGCCGGGCGT TCGCCGCGAT GAGCGCCGCG CTCGCCTTCG GCACGGTGGG CGGCCCGTTG
GTTGGCGCGT TGCTGACCAC CGCCGACATC GCGGGGCTCG GCTGGCGGGC GATCTTCCTG
GTCAACGTGC CGATCGGGAT CGCCGCGTTC ATCGCCGCGC GGGTGCTGCT GCCGGAGTCG
GAAGCCAATC GCCGGGAACG GCTCGACCTG GTCGGAGCCG TTCTGATCAC GCTGGCGGTG
CTGCTGCTCG TCTACCCGCT GGTGCAGGGC CGGGAGCAGG ACTGGCCGGT GTGGACGTAC
GCCAGCATGG TCAGCGGCCT GCTGGTCTTC GCGGTGTTCG TCCAGCACCA GCGCACCCGT
ACCGACTCAC CGCTGGTACC GATGTCGCTG TTCCGACACC GCTCGTTCAA CGCGGGTCTG
GTGGTGGTCT TCCTCTTCCA GGGCGCGGTG ATGTCGTTCT TCCTGGTCAT CACCATCTAC
CTACAGATCG GGGTGGGATA CAGCATCCTC CGGGCCGGTC TGTCCGGCCT ACCCTGGGAC
ATCGCCGTGC CGTTGCTCGG CTGGCTGTCC GCCCGGGCGA TCACGCCCAG AATCGGCCGG
ACGGGCCTTC AGCTCGGCTT GGTGCTGCTG ATCGCCAGCA TGTTCTGGTT CATGTGGGTG
ATCGACAGCA CCCCACAGGT GAGCATCTGG CAGCTCCTGG TGCCGATGTT CATCGGGGGT
GCCGGCATGG GTATGACGTT CCCGCCGCTG ATGGGCTACT CGCTCGCCGA CGTCCCGGGA
AACCAGGCCG GATCCGCCTC CGGAGTGGTC AACGCGAACT ACCAGATCGG CGTGACCCTC
GGTATCGCCG CCTGCGGCAC GCTGTTCTTC AGCCTGCTGG CCGCGCAAAC GCCCCACGCC
ACCGCAACCG TTGTGCCGGA GCTCCGCGCG GACCTGGTGG CCGTGGGCGT CGCCGACACG
CAGGCGGCAG AGATCGGTGA CCGGTTCCGC GACTGCCTCG AAAGCCAGCT CGGCGGGGCC
GACCCGACCC TGCCGCCAGC GGGCTGCGAC AGCGCTGGGT TGGCCGCGGG CAGCGGTACC
ACCGCGGTGA TCGAGCAGCG GTCGTTCGAG GCGAGCCAGA TCAGCTTCCA ACGGGCCATG
GTGGGCACGC TCTGGTACAG CGTGATCAGC TTCGTGCTGG CGCTGGTGGG TAGCTTCCTG
CTGCCCCGCC GTTGA
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| Protein sequence | MSDDTRTPSS AETGTVQAPA PAPPDEFVPP ITGRKRTLAL VVVLTGFVLD LLDITIVNVA
LPSIRDGIDA TAATMQWLVA GYALAFASML IISGRLGDIV GVRRMFLIGV AGFTLTSLLA
GLAQTPEQLI VLRFVQGAMG AIMVPQVYTL IQLLYAPKER GRAFAAMSAA LAFGTVGGPL
VGALLTTADI AGLGWRAIFL VNVPIGIAAF IAARVLLPES EANRRERLDL VGAVLITLAV
LLLVYPLVQG REQDWPVWTY ASMVSGLLVF AVFVQHQRTR TDSPLVPMSL FRHRSFNAGL
VVVFLFQGAV MSFFLVITIY LQIGVGYSIL RAGLSGLPWD IAVPLLGWLS ARAITPRIGR
TGLQLGLVLL IASMFWFMWV IDSTPQVSIW QLLVPMFIGG AGMGMTFPPL MGYSLADVPG
NQAGSASGVV NANYQIGVTL GIAACGTLFF SLLAAQTPHA TATVVPELRA DLVAVGVADT
QAAEIGDRFR DCLESQLGGA DPTLPPAGCD SAGLAAGSGT TAVIEQRSFE ASQISFQRAM
VGTLWYSVIS FVLALVGSFL LPRR
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