| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2750 |
|---|
| Symbol | |
|---|
| ID | 5059213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3098059 |
|---|
| End bp | 3098751 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640475005 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001159571 |
|---|
| Protein GI | 145595274 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0908171 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGCGA CCGTGAGAGT GCGCCTGCTG ACCGGACTGC TCGGTGCGGC CGCTGCGGCC
GTGTTGGTGT TCGGCGTGTG GCCGACCTTG CTTGGGCCAT CCGGCCTGGA ATTAGGGCGT
GGCATGGTCC CGATGCCCAC GCCGCAGCCA ATGTTGTCCG TGGCGGTGCG GCCTGACGAC
GGATTCGGCG ATCGGTGGCA GGCTACCGGC GACGACTACC ACGAGTTGTT CGCGTGGAAG
GACACCTCCG ACGGCACTCG GGATGCCGCC AAAGGGCTAC CGCCGGTCGA GCTGTTCTTC
CCGACGATGG GGCTTTCGAT CTTGGGGCCG ACGTGGACCG ATCGGATCAG CTTCGCCGGG
CCGGAGCTCG CGGCGCAGGC GTTGCTCCTG TCTGTGCTCT GGCTGCTGTG GCGTATCGTC
CGCACGGCGC CTACCGGCGA GGTGTTCACC ACCGTCAACG CCCGTCGGAT AGTCGGCATC
GGCTTGGTGG TGGCGGTTGG CGGTAGCGCG GTCCAGCTAC TCGGTCTCGC CGCTCACCAG
GCCATCGTCG CCCGCTCCGC CGCGGCTGGC ATCGTTGACG TCGCCTTCTC GTTCTCGTTC
GTGCCACTGG CAATCGGTGC GACTGTTCTG TTGCTGGCCG AGGTGTTTCG GCAGGGTGTG
CGGCTGCGAG CCGACGTGGC CGGGCTGGTG TGA
|
|---|
| Protein sequence | MSATVRVRLL TGLLGAAAAA VLVFGVWPTL LGPSGLELGR GMVPMPTPQP MLSVAVRPDD
GFGDRWQATG DDYHELFAWK DTSDGTRDAA KGLPPVELFF PTMGLSILGP TWTDRISFAG
PELAAQALLL SVLWLLWRIV RTAPTGEVFT TVNARRIVGI GLVVAVGGSA VQLLGLAAHQ
AIVARSAAAG IVDVAFSFSF VPLAIGATVL LLAEVFRQGV RLRADVAGLV
|
|---|
| |