| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2633 |
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| Symbol | |
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| ID | 5059096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2954961 |
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| End bp | 2955719 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640474889 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001159455 |
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| Protein GI | 145595158 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.522404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.186354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCCCC TCGATTTCAC TGGTCGTGGT GTGGTGGTCA CCGGGGGGAC GCGAGGCGTC
GGTGCCGCGA TCGCCTCGGC GTTCCTTGCG GCGGGCGCTC GGGTGCTGGT CTGCGGCCGA
ACCCAACCGT CCTCGGTGGT GCCCGACTTC GTTCAGGCTG ATGTTCGTGA TCCCGGGCAG
GCCGCCGCGC TGGTGGCGGC GGCGATTGAC CGGTTCGGTC GCCTCGACGT GCTGGTGAAC
AACGCAGGTG GTGGTCCGCC GGTGGCGGCC GCCAGCGCGT CGCCCCGGCT GCACGCCAAG
ATCGTTGAGC TCAACCTGGT TGCCCCGTTG CATGTTGCGC AGGCAGCCAA CACGATCATG
CAACAGCAGC CCGGTGGCGG GGCCATCGTC ATGGTCGGAA GTGTGAGCGG CACACGTCCA
TCGCCCGGCT CCGCTGCATA TGGCGCTGCC AAGGCTGGAC TGCACCATCT GGCGACGAGT
CTGGCCGCCG AGTGGGCGCC GGCGGTGCGG GTGAACAGTG TTGTCCCCGG CCCGGTGGTC
GGGGACGCGG GCCTCCAGCT GGACCCGGCA GCGGTGGCGC GCACCGTTCC CCTGGGGCGC
CCCGCGACGC CAGCCGAGGT GGCCGGAGTC TGTCTGCTGT TGGCCTCTCC GCTGGCCTCC
TATGTGACCG GGGCGGCGGT GGCGGTGCAC GGCGGTGGCG AGTGGCCGGG CTATCTTGCA
GATGTGCGGG CGCAGGTGTC GCCCCCGACC CAGGTGTAG
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| Protein sequence | MEPLDFTGRG VVVTGGTRGV GAAIASAFLA AGARVLVCGR TQPSSVVPDF VQADVRDPGQ
AAALVAAAID RFGRLDVLVN NAGGGPPVAA ASASPRLHAK IVELNLVAPL HVAQAANTIM
QQQPGGGAIV MVGSVSGTRP SPGSAAYGAA KAGLHHLATS LAAEWAPAVR VNSVVPGPVV
GDAGLQLDPA AVARTVPLGR PATPAEVAGV CLLLASPLAS YVTGAAVAVH GGGEWPGYLA
DVRAQVSPPT QV
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