| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2513 |
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| Symbol | |
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| ID | 5058976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2823524 |
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| End bp | 2826418 |
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| Gene Length | 2895 bp |
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| Protein Length | 964 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640474771 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001159337 |
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| Protein GI | 145595040 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0733559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATGGTG CGCCGCTCGT CGGCCGGACC GAATTACTGG AGGCGGTAAG ATCCACTCTG
GTCGGCGCCG GCCAGGGGCA ACCCACCGCG GTTTTCCTCA CTGGTGAGAG TGGGGTTGGC
AAGAGTCGGC TGCTGCGCGA GGTCGGTTCC GAGCTGCGGG ACGCGGGTGC CCTTCTGCTC
ACCGGTGCCT GTTTGGACAT CGGTGACGCC TCCCCGCTGC ATCCACTGCG CCAGGCCCTG
CGTCGCCTCG ACGCCGAGCT GACCACCGGG CCCATCCGCG CCTCCTCGGC CCTCCGGGGG
CTGCTCGAGA TGTTCGTCGA CCAGACCGGT GGCCCCGACG GTGCCGGGGC GCTGTTGGAG
CAGGTCTCCC ACGGACTGCA CCTGATCGCC GGCGGGCGAC AGTTGGTACT CGTCCTCGAT
GACCTCCAGT GGGCCGACCG CAGCACCCGG CAGCTCTTGC TCTACCTGCT TGCCGGGCTG
GGTGATCTGC AACTCTCGGT GCTGGCCGCC GTTCGCGCCG AGTCCCTCCA GGGCGCGCAC
CCGCTGCGCC GGATGCTCAC CGAGCTGCGC CGCCTGCGTA CGGTGCGGGT GCTCGACCTG
GCACCGTTGG ATCGTGCCGC CACCGAGCAG TTGGCTGCCG CGGTGGCTGG TGAAGCCCTG
CCAACAGCCG CCGCCGAGCA GCTGTGGCGG CGGAGCGGCG GTAACCCCTT CGTGGTGGAG
GAGCTGGCTC GCGATCTGCG GGACGGCCGG GACGGACTCT CTGACACGTT GCGGGAGATC
TTCTTGACCC GGATGGAGGT GCTGCCGCCG GACGCGCACG CCGTGGTACG CGCAGTAGCC
GTCGGGGTGG AGCCGGTGGA GCACTGGCTG CTCGCAAAGG TGGTGCGACT GCCGGACGAC
GAGCTGATCG ACGCGGTCCG GGAAGCCGTC GCGCACCGGT TGCTGGTCGG CGCCGACGAG
GGCTACCGAC TACGACACCG GCTGGTCGCC GAGGTGCTGG AGGAGGAGCT GCTGCCGGTG
GAGCGAGTCG CCCTGCACCG GCGCTACGCG CAGGCGTTGA CCGGCGCGCA CGCCGAACTG
CACCAGGCCC GGCTGGCGCA CCACTGGCGC CTCGCCGGGG AGCCGGTCCG GGCGCTGCCG
GCAGCGATGG CGGCCGCCGA GGAGGCCGAG CGGCTGCACG GGTACGTCGA GGCGCACCGG
CACTGGTCGA GTGCCCTGCA GCTGGCCGAG GCGCCTGCCG TCGGGTCAGC TGTCGACCGG
GTGATGTTGC TGGAGCGGAC CGCCGAGGCG GCGCACCACT GCGGCGAGCA CGCCCGGGCC
CTGGCGCTGC TGGAGGAGGT GGCGGGTGCC GACGCCTCCC GGTCGGCCTG CGGTCTGTCC
ATCCGGCGGG CCCGCTACCT CGCCGCCGCC GGTCGGTCCG CGCTGGCCGA GGTCGAATAC
CAGCGGGCCC TGGCTGCCGC CGACTGTACG CCCCGCGAGC GGGCGACCAT CACGGCTCAC
CTCGCCGAGC TGCTGCTACA TCTGGGCCGG TATGCCGACG CCGGTACGCG TGCCCGGGAG
GCGCTGGAGC TGGCCGACAC TGTTACGGGC TCCACGTCGG AGGTCGTGTT GGCCAGCGCC
GCCCTGGGAT TCTCCGAGGC CTTCCGGGAG GATCCGGAGG CCGGCCTGGC CGTGGTGCGT
CGCGCCCTGG ACACGGCTGA GCGGTTCGGC CGTCCGGAGG ATGTGGCCTG CGCGTACCTG
CATCTGGCCG AGCTGCTGAC CGGGCCGCTG AACACTCTCG AGGAGGGGGT GGTCGTCGCG
CGGCGGGGCG CGGAGCGGGT CGCCGCCCTC GGGCTCGGCC GGACCTACGA GACCCGGCTG
CTGGCCATCG CCATCAACGG ACTGTTCCGG GTTGGTCAGT GGGCCGAGGC GGAGAAGGTG
GCCGCGACGG CGCTGCGGCA CCGACCCTCC GGTGCGGAAG CGGTCGAGGT GCTGCTGGCC
CGCTGTCGGC TCTCCGTTGG ATACGGCGAC ATCGAGGCTG CCGACCGGGA CCTCGACGCG
GTCGCCACCC TCTGCGCAGG CGGCGGGGCG CGACACGTGA TTCCGTTGCT CACCCTGCGA
GCCGGTCTGG CAATGTGGCA GGGCCGGCAC GACCTGGCGC GGAAGGCCGT ACAACGGGGC
CTGACCGAGA GCCGCTCCGA TGACCTGGTC ATTCTTGCCG CGCTGATCTG GCACGGCCTG
CGGGCAGAGG CCGAGGCGCA CGCCAGCCGG AGCCTCTCGG TGGACGAGAC GGCGGTGCGG
CGGCTCCGCG AGGCCGCGGA TCGGGTGGCT CGTCGGGCGG GGACGGCGGC CCGCCCGGTA
CGCAGCGTGG TCGAGGCGTT CCTGGCCCTC TGCGCCGGCG AGGTGAGCCG GATCGACGGT
AGCGACCCGG AGCTCTGGGC CCGGTCGGTG ACAGAGTGGG ACCGGCGACA CCACCCCTAT
CCGGCGACCT ACTCGCGACT GCGCCAGGCG GAGGCGTTAC TCGCCCGCCG CAGCCGTAGC
GCGAAGGCCG GGAAGCTGCT CCGCCAGGCG TACCAGGCGG CCCTGGGGCT GGGGGCGGTG
CCGCTGACCG CTGAGATCAG GACCGTCGCC GGCCGCGCAC GGGTCGTGTT GACGGAGCAG
GGTACGACGG CCGGTAACCC GACCTCTAGC GTCCCGGCCG ATGGGGAGGA ACTGGCGGTG
CTGACCGCAC GCGAGCGGGA GGTGCTCGCG GCGGTGGCAG AGGGGCTGAC CAACAAGGAA
GTCGGCCAGC GACTGTTCAT CAGTGAGCGG ACCATCGGGG TGCACGTCTC GCACATCTTC
GACAAGCTGC AGGTCCGTAC CCGGGTGCAG GCGAGCGCGA TCCTCCTCCG AAACCAGCCA
CCGGACGCGC GTTGA
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| Protein sequence | MDGAPLVGRT ELLEAVRSTL VGAGQGQPTA VFLTGESGVG KSRLLREVGS ELRDAGALLL
TGACLDIGDA SPLHPLRQAL RRLDAELTTG PIRASSALRG LLEMFVDQTG GPDGAGALLE
QVSHGLHLIA GGRQLVLVLD DLQWADRSTR QLLLYLLAGL GDLQLSVLAA VRAESLQGAH
PLRRMLTELR RLRTVRVLDL APLDRAATEQ LAAAVAGEAL PTAAAEQLWR RSGGNPFVVE
ELARDLRDGR DGLSDTLREI FLTRMEVLPP DAHAVVRAVA VGVEPVEHWL LAKVVRLPDD
ELIDAVREAV AHRLLVGADE GYRLRHRLVA EVLEEELLPV ERVALHRRYA QALTGAHAEL
HQARLAHHWR LAGEPVRALP AAMAAAEEAE RLHGYVEAHR HWSSALQLAE APAVGSAVDR
VMLLERTAEA AHHCGEHARA LALLEEVAGA DASRSACGLS IRRARYLAAA GRSALAEVEY
QRALAAADCT PRERATITAH LAELLLHLGR YADAGTRARE ALELADTVTG STSEVVLASA
ALGFSEAFRE DPEAGLAVVR RALDTAERFG RPEDVACAYL HLAELLTGPL NTLEEGVVVA
RRGAERVAAL GLGRTYETRL LAIAINGLFR VGQWAEAEKV AATALRHRPS GAEAVEVLLA
RCRLSVGYGD IEAADRDLDA VATLCAGGGA RHVIPLLTLR AGLAMWQGRH DLARKAVQRG
LTESRSDDLV ILAALIWHGL RAEAEAHASR SLSVDETAVR RLREAADRVA RRAGTAARPV
RSVVEAFLAL CAGEVSRIDG SDPELWARSV TEWDRRHHPY PATYSRLRQA EALLARRSRS
AKAGKLLRQA YQAALGLGAV PLTAEIRTVA GRARVVLTEQ GTTAGNPTSS VPADGEELAV
LTAREREVLA AVAEGLTNKE VGQRLFISER TIGVHVSHIF DKLQVRTRVQ ASAILLRNQP
PDAR
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