| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2437 |
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| Symbol | |
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| ID | 5058900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2738466 |
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| End bp | 2740259 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640474696 |
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| Product | transcriptional activator domain-containing protein |
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| Protein accession | YP_001159262 |
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| Protein GI | 145594965 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0868593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.755858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTCGG TCGCGGTGAG CCCATCCGGC GGTGACCAGC GAGCCCGCCC GGCGGTGTTC
CGGGTGCTCG GCCCGCTGAC CCTCAGCAGC GGCGGGGACA CGCTGGTTCT GCCGCCGTCG
AAGGTGACCT CGTTGCTTGC CGTGCTGCTG TTGCACCCCG ACGAGGTGAT CTCGGTCAGT
ACCCTGCAGC AGGCTGTCTG GGGTGACGCG CAGCCTGCCT CGGCCAAGGC CGCGTTGCAG
ACCTGCACCC TGCGGCTTCG GCAACTGTTT CACCGGCACG GCATCACCGG CAGCGTGATC
AAGACAGTGC CGGGTGGCTA CCGGATCACC GCTACCGCCG CCACCGTCGA CCTGATGCGC
TTCCGCGAGT TGATCGGCCG TACCCGCGAC GTGCCGGATC CAGAGGCGGA GCTGGCGAGG
CTGGAGGAGG CGCTCGCGCT GTGGAGCGAC CCAATGCTGG CCAATGTGCC ATCAGAGGCG
CTGCACCGGG ACGTGGTACC CCGGATCAGC GAGGAGCGGG TCCGGGCGAT CGAGCGGGTG
TGCGACCTGA AGATCAGCCT CGGTCGGGAC CGGTCCGCGC TGGTGGACCT CTGGACCGCC
AACCGCGCGT ACCCCGCGAA CGAGCGCTTC TCCGCACAGC TCGCCTCGGT GCTCTACCGC
ACCGGTCGGC AGGCGGACGC CCTGGCCGAA CTGCGCCGGA TCCGGGACTA TCTTCGCCAC
GAACTCGGCA TCGCTCCGGG CCCGACCCTG CGGGAGTTGG AGCTGACCAT TCTGCGGGGC
GAAGCGTCCA CTCCGGTCGC TCCAGTAGGG AGACCCGCCA CCGTAGTGTC CCGGCACCCG
GTCGCGTCCA GCCTCATCGG TCGGGACGCG CTCGGCGAGA CCGTCGCCGA GCGCCTCCGC
GCGGATTGCC CGATCGTGGT GCTCACCGGC CCACCCGGCG TCGGCAAAAC CGCGCTGGCG
CAGCACGTCG GGCAGCTCGT CGCCCCCCAC TTCCCCGGCG GTCAACTCCG GGTGGCGGCG
GACACCGTGT CGCACGACGC CCAACGGCGG CTGATCACCC CGGTTGACCA GGGCCACGGT
GCCCAGGTGG GCCGACGGCT GCTGTTCGCC GACGACGTGG TCAACGGCAG TCAGGTACGA
GCCCTGCCGG CCCTTTTGGC ACCCGGTGAC GCGCTGCTGC TGACCAGTCG CCAAAGCCTG
TCTGGTCCGG TTACCCGACT TGGCGGCTGG TTGCACCGGG TGGAGCCGCT CGAGCCTGCC
GACTCGCTCC AGTTGCTCCG TTCCGCGCTG GGACCCGAGC AGGTCGATGC CGACCCGCAG
AGCGCCGCGG AGATCGCGGC GCTCTGCGAC CACCTGCCAC TCGCGCTGCG CATCGCCGCC
ACCCGCATCC TGCTGCGCCC CCGGACGGAA CTCGCGGCGG CGGCGGAGTG GCTGCGTGCG
GACCCGCTGA GCCGGCTGAG TCTGCCCGGC GAACCGGACA TGTCACTCGG CCACCGCTTC
GACGAGGCCC TGTCCCGAGC CGGCGAAACG TTGGAGGCGG CCTTCGTCAG GCTGGCCACC
GCGGCCCCCG CCGCCATCAC CGCCGCACCG GCCGCACAGC TGCTCGACGT TGACCCGGCC
ACGGCTCGCG ACCTGCTCGA CGGGCTGGTC GACCACAGCC TGGTCGAGGA GGCCGCGGAT
CACTACTGGA TACGAGCCTT GCTGCGGCGA CACGCCCAAC TCGCGGCCGA ACGGCACGCC
CCCCACCCCG ACCCACCGCG ACGGCCGCAC CGAGCGAAGG GATCCATGCG ATGA
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| Protein sequence | MESVAVSPSG GDQRARPAVF RVLGPLTLSS GGDTLVLPPS KVTSLLAVLL LHPDEVISVS
TLQQAVWGDA QPASAKAALQ TCTLRLRQLF HRHGITGSVI KTVPGGYRIT ATAATVDLMR
FRELIGRTRD VPDPEAELAR LEEALALWSD PMLANVPSEA LHRDVVPRIS EERVRAIERV
CDLKISLGRD RSALVDLWTA NRAYPANERF SAQLASVLYR TGRQADALAE LRRIRDYLRH
ELGIAPGPTL RELELTILRG EASTPVAPVG RPATVVSRHP VASSLIGRDA LGETVAERLR
ADCPIVVLTG PPGVGKTALA QHVGQLVAPH FPGGQLRVAA DTVSHDAQRR LITPVDQGHG
AQVGRRLLFA DDVVNGSQVR ALPALLAPGD ALLLTSRQSL SGPVTRLGGW LHRVEPLEPA
DSLQLLRSAL GPEQVDADPQ SAAEIAALCD HLPLALRIAA TRILLRPRTE LAAAAEWLRA
DPLSRLSLPG EPDMSLGHRF DEALSRAGET LEAAFVRLAT AAPAAITAAP AAQLLDVDPA
TARDLLDGLV DHSLVEEAAD HYWIRALLRR HAQLAAERHA PHPDPPRRPH RAKGSMR
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