| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2380 |
|---|
| Symbol | |
|---|
| ID | 5058843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2675541 |
|---|
| End bp | 2676062 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640474639 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001159205 |
|---|
| Protein GI | 145594908 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1259] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.113259 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTACCGTG CAGAAGGGGT GCGGTGCGGC GTAGGTGACA ACGACACGGA GGCGGCGGTG
CGCGAGCTGA GTGTGGTCGG GGTTCGGGTG GAGCTGCCGG GCAACCAGCC GATCGTCCTG
CTCCGGGAGG TCGAGGGGGA CCGCTATCTG CCGATTTGGA TCGGCGCGGT CGAGGCCACG
GCGATTGCCT ACGAGCAGCA GGGGGTCAAG CCGACGAGGC CGTTGACGCA CGATCTTCTT
CGGGATGTGT TGGCGGCGTT GGAAGCGCCG TTGCAGGCGG TGGAGATCAC TGAGTTGAAG
GAGAACGTCT TCTTCGCTGA TCTGTTGCTT GGTGACGGGG TGCGGGTGTC GGCGCGGCCG
AGTGATTCCA TCGCGTTGGC GTTGCGGGTG GGGGCGCCGA TTCGGTGTGC CGACGAGGTT
CTCAGTGAGG CCGGGATTGT GATTCCGGAC GAGCAGGAGG ACGAGGTGGA GAAGTTCCGG
GAGTTCCTGG ACCAGGTGAG TCCGGAGGAC TTTGCCGGTT GA
|
|---|
| Protein sequence | MYRAEGVRCG VGDNDTEAAV RELSVVGVRV ELPGNQPIVL LREVEGDRYL PIWIGAVEAT
AIAYEQQGVK PTRPLTHDLL RDVLAALEAP LQAVEITELK ENVFFADLLL GDGVRVSARP
SDSIALALRV GAPIRCADEV LSEAGIVIPD EQEDEVEKFR EFLDQVSPED FAG
|
|---|
| |