| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2377 |
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| Symbol | |
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| ID | 5058840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2670757 |
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| End bp | 2673573 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640474636 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_001159202 |
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| Protein GI | 145594905 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.130183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTAG AGCAGTTTGC CGCCCGTCAT ATCGGTCCGG ATCCGCAGGA CGAACGCCGG
ATGTTGGAGG TCGTCGGTTA CGGCTCTGTT GACGAGCTGA TGGATGCGGC GATCCCGGAG
GCGATCCGGT GGTCGGGCAC GCTGGACCTG CCGGCGCCGG CCAGTGAGTC GGAGGCGTTG
GCGCAGCTGC GGGCGTTGGC TGAGCGCAAC ACTGCTGCGG TGTCGATGAT TGGTCTTGGC
TACTACGGCA CGCATACTCC GGCGGTGATC CGGCGCAATG TGTTGGAGAA CCCGGGCTGG
TACACCGCGT ACACGCCGTA CCAGCCGGAG ATCAGCCAGG GCCGGCTGGA GGCGTTGCTG
AACTTCCAGA CCATGGTCAC CGATCTGACC GGGCTGGCGA CCGCGAACGC TTCGATGCTC
GATGAGGGCA CCGCGGCGGC CGAGGCGATG ACGCTGGCCC GACGGGCGAG TCGCAGCCGG
AGTCAGGTGT ATGTGGTGGA TGCGGACACG CTGCCGCAGA CGGTGGCGGT GATTGTGGGT
CGGGCCGAGC CGCTCGGTAT CGACGTGCAG GTGGTTGATG TTGATGGCGG CGACCTGCCG
GAGGAGTTCT TCGGCCTGCA TGTGCAGTAT CCGGGGGCGT CCGGGGCGGT GCGGGACCAT
ACGGGTGTGG TCAGCGCCGC GCATGCCGCC GGCGCGTTGG TGACCGTGGC CGCCGACCTG
TTGGCGTTGA CTCTGCTGCG CCCGCCGGGA GAGATCGGTG TGGATATCGC GGTGGGCACC
ACCCAGCGGT TCGGGGTGCC GATGGGCTTC GGCGGCCCGC ACGCCGGTTA TCTGGCCGTC
CGCGCGGGCT TGCAGCGGAT GCTGCCGGGC CGGCTGGTCG GTGTGTCGCG GGACGCGGAC
GGGGAGTCGG CCTACCGGTT GGCGTTGCAG ACTCGGGAGC AGCACATCCG CCGGGAGAAG
GCGACGAGCA ACATCTGCAC CGCGCAGGTG CTTCTCGCGG TGATGGCCGG GATGTACGCG
GTCTACCACG GCCCGGACGG GTTGCGGGCG ATTGGGGCGC GGACCCATGC GATGGCGGCG
CGGCTGGCGG CTGGGTTGCA CGCGGGTGGG GTGGATGTCG CGGATGTTCC GTTCTTCGAC
ACTGTCTCGG CGGTCGTGCC GGGTCGGGCG GCCGAGGTGG TGGCCGCTGC CGAGCGGCGG
GGGGTGAGTC TGCGGCTGGT GGATACCGAC CGGGTGGGTG TTGCCTGCGA CGAGACCACG
ACGGAGGAGC ATCTCGCGGC GGTGTGGGCG GCGTTCGGGG TGCCGGTCTT CGGTGGTGAG
GTGGATCCGG CGTTGCCGGC GGCGTTGGCC CGCACGTCGG ATTTCCTGAC CCACCCGGTG
TTTACCGCCC ATCGGTCGGA GACGGCGATG CTGCGGTACC TGCGCGGGCT GGCGGACCTC
GACTATGCCT TGGATCGGGG CATGATCCCG TTGGGGTCGT GCACGATGAA GCTGAACGCG
ACCACCGAGA TGGAGCCGGT GAGCTGGGCG CAGTTCGCGC AGGTGCATCC GTTGGCGCCC
GAGTCGCAGA CCGCCGGTTA CCGGGAGCTG ATTGTCCAGT TGGAGGGTTG GCTGGCGGAG
GTGACCGGGT ACGACGCGGT CAGTGTGCAG CCCAACGCCG GCTCGCAGGG GGAGTTGGCG
GGGTTGTTGG CGATCCGCGC GTTCCACCAG TCGCGGGATG CGGGGCACCG GAATGTGTGC
CTGATTCCGT CGTCGGCGCA TGGTACGAAC GCCGCGTCGG CGGTGATGGC GGGGATGCGG
GTGGTGGTGG TCGGCTGTGA CGCCGACGGC AACATCGACC TGATTGACCT CGACAGCAAG
ATCGATGCGC ATCGGGAGAC GCTCGCCGCG ATCATGGTGA CGTATCCGTC GACGCACGGC
GTGTATGAGA CGGGTATCGC TCAGGTGTGC GCGAAGGTGC ACGACGCGGG CGGGCAGGTG
TATGTCGACG GGGCGAACCT CAATGCCCTG GTGGGTTTCG TCAAGCCGGG ACGGTTCGGT
GCGGACGTGT CGCATCTGAA TCTGCACAAG ACGTTCTGCA TCCCGCATGG TGGTGGTGGG
CCGGGCGTGG GGCCGGTGGC GGTGCGCTCG CATCTGGCGC CGTTCTTGCC GGGTGACCCG
CTCGCGGGGG ATTCGGGCCG GCCGGCGGTG TCGGCGGCCC GGTACGGGTC GGCGGGGATT
CTGCCGATTC CGTGGATGTA TCTGCGGATG ATGGGTGCGG CTGGGCTGAC CCGGGCCACG
GGGGTGGCGG TGTTGGCGGC CAACTATGTG GCGGCGCGGC TGCGCGGCGC GTTCCCGGTG
TTGTACGCGG GTAACAAGGG CCTGGTGGCG CACGAGTGCA TTCTGGACCT GCGGCCGTTG
ACGAAGGCGA CGGGCGTCAG CGTTGATGAT GTGGCCAAGC GTCTGATCGA CTACGGTTTC
CACGCGCCGA CGATGTCGTT CCCGGTCGCG GGGACGTTGA TGGTGGAGCC GACGGAGAGT
GAGGATCTCA CCGAGTTGGA TCGGTTCTGC GACGCGTTGA TCGCGATCCG GGCCGAGATC
GACAAGGTGG GGTCGGGGGA GTGGCCGGCG GAGGACAACC CGCTGGTGAA CGCCCCGCAC
ACCGCGGCGA TGGTCTCGGC TGACCAGTGG TCGCATCCGT ATCCGCGGTC GGTCGGGGCC
TATCCGGCGG GGAGTCGGCT GGGGAAGTAC TGGCCGCCGG TGCGGCGGAT CGACGGCGCG
TACGGCGACC GGAACCTGGT GTGTTCCTGT CCGGCGCCGC AGGCGTTTGA GGAGTGA
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| Protein sequence | MSLEQFAARH IGPDPQDERR MLEVVGYGSV DELMDAAIPE AIRWSGTLDL PAPASESEAL
AQLRALAERN TAAVSMIGLG YYGTHTPAVI RRNVLENPGW YTAYTPYQPE ISQGRLEALL
NFQTMVTDLT GLATANASML DEGTAAAEAM TLARRASRSR SQVYVVDADT LPQTVAVIVG
RAEPLGIDVQ VVDVDGGDLP EEFFGLHVQY PGASGAVRDH TGVVSAAHAA GALVTVAADL
LALTLLRPPG EIGVDIAVGT TQRFGVPMGF GGPHAGYLAV RAGLQRMLPG RLVGVSRDAD
GESAYRLALQ TREQHIRREK ATSNICTAQV LLAVMAGMYA VYHGPDGLRA IGARTHAMAA
RLAAGLHAGG VDVADVPFFD TVSAVVPGRA AEVVAAAERR GVSLRLVDTD RVGVACDETT
TEEHLAAVWA AFGVPVFGGE VDPALPAALA RTSDFLTHPV FTAHRSETAM LRYLRGLADL
DYALDRGMIP LGSCTMKLNA TTEMEPVSWA QFAQVHPLAP ESQTAGYREL IVQLEGWLAE
VTGYDAVSVQ PNAGSQGELA GLLAIRAFHQ SRDAGHRNVC LIPSSAHGTN AASAVMAGMR
VVVVGCDADG NIDLIDLDSK IDAHRETLAA IMVTYPSTHG VYETGIAQVC AKVHDAGGQV
YVDGANLNAL VGFVKPGRFG ADVSHLNLHK TFCIPHGGGG PGVGPVAVRS HLAPFLPGDP
LAGDSGRPAV SAARYGSAGI LPIPWMYLRM MGAAGLTRAT GVAVLAANYV AARLRGAFPV
LYAGNKGLVA HECILDLRPL TKATGVSVDD VAKRLIDYGF HAPTMSFPVA GTLMVEPTES
EDLTELDRFC DALIAIRAEI DKVGSGEWPA EDNPLVNAPH TAAMVSADQW SHPYPRSVGA
YPAGSRLGKY WPPVRRIDGA YGDRNLVCSC PAPQAFEE
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