| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2322 |
|---|
| Symbol | |
|---|
| ID | 5058785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2617765 |
|---|
| End bp | 2618256 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640474582 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001159148 |
|---|
| Protein GI | 145594851 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0472584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00699657 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAC ACCACCACGA CCAGCGAACC CCCGAACCGA CCACGGTGGC TGCCTGGTTC
GTCCTCGGCG TCGCACCCAC CGAAGACGTC CCTTGGTGGG CCGCACAATG GCTCGCAGAC
GGCCACGACA GACCAGCGCT ACGGGAACTG GCCGGGCTCA ACGGCCAGGA CTCGCACACC
GTCAACGACC TACTCCCGGT CGCCCTGGCC GAGCTGGGAA CTACGCTGCC GTCCACCACC
GTGGCAGCAG CCAGCGAAGC ATTCCGTCAA CTGGCCGAGA TGTGCCTGTC CGAACGCGCA
GGCGAGCTAT GGGTCACCCA ACAAGTCGAC GACATCGTCA CACGCGCCGA CTACGACAAC
GAGGTGATCG ACCTTCCCCT AGGCCAGCTC TACGGCACCG AGGACGCGTG GCAAGGCGAC
GGAGGGCCAC CGATCGAGGA ACTCAAGAAC ACGGTGCGGG CCTGCTGCGC AGCACAGTTG
CGTGCCGCTT AG
|
|---|
| Protein sequence | MTEHHHDQRT PEPTTVAAWF VLGVAPTEDV PWWAAQWLAD GHDRPALREL AGLNGQDSHT
VNDLLPVALA ELGTTLPSTT VAAASEAFRQ LAEMCLSERA GELWVTQQVD DIVTRADYDN
EVIDLPLGQL YGTEDAWQGD GGPPIEELKN TVRACCAAQL RAA
|
|---|
| |