Gene Strop_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2250 
Symbol 
ID5058713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2544340 
End bp2545353 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content72% 
IMG OID640474512 
Producthypothetical protein 
Protein accessionYP_001159078 
Protein GI145594781 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0118565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGGT CTACCCGGTC CGGGTCCCGT ACCTCCGCGG ATCGGTTGGC CCGGCTGCTC 
AACCTGGTGC CCTTCCTACT GGCCCGGCCC GGTATCGAGA TCGCCGAGGC AGCGGGTGAC
CTGGGGGTGA CCGAGCGGCA GCTGCGGGAG GACCTGGAGC TGCTCTGGGT GTGTGGGCTG
CCGGGCTACG GCCCGGGGGA CCTGATCGAC ATGGCCTTCG ACGGTGACCG GGTGACGATC
ACCTACGACG CCGGCATCGA TCGACCGCTG CGGCTGACCC CCGACGAGGC CCTCGCGCTG
GTTGTGGCGC TGCGAATGCT GGCGGAGACG CCGGGGGTGG CCAACCGGGA AGCAGTGGAG
CGGGCTCTGG TCAAGATCGA AAGTGCCGCG GGTGACCGGT TGGGTGCCCC GGTCGCGGTA
CGGCTGCCGG CAGACAATCG CCGGGTGGCG GAGCTGCGGG CGGCGGTGGA GAGCGGCCGG
GCGCTGCGGA TCACCTACTA CTCGGTGGCC CGGGACGAGA CGATCGAGCG GGTCGTCGAC
CCCCTGCGAA TACTCGTCGT CGGCGGCCGG GCGTACATGG AGGCCTGGTG CCGCCGGGCC
GAGGGGATGC GGGTGTTCCG GGTCGACCGG ATCGACGCGG TGACCCGGTT GGCCGAGCCG
GCGCGGGTGC CGTCGCAGGC GGTGCCGCAC GACCTCACCG GCGGTGTGTT CCGGCCCACG
GCGGATCTGC CGCTGGTCAC CCTGCGAATC GGTCGGAGTG AGCGGTGGAT CACCGAGTAC
TACCCGTGTG AGCGGGTCGA ACCAGGCGAT GGCGAATGGT TGGTCTCACT CCGGGTCACC
GACCTGGGCT GGGCCCGCCG CTTCGTGTTG GGCCTGGGTC CGGAGGTCAC CGTGGTGGCG
CCGGCGGAGC TGGCCACACA GGTGCATGCC GCGGCGACCG CTGCCCTCGA GGCGTACGCG
ATGCCGCCGC CGAGCGCGGC GGCCGACCCG GCGGCATCGA CGAGCAGCCG GTAG
 
Protein sequence
MTRSTRSGSR TSADRLARLL NLVPFLLARP GIEIAEAAGD LGVTERQLRE DLELLWVCGL 
PGYGPGDLID MAFDGDRVTI TYDAGIDRPL RLTPDEALAL VVALRMLAET PGVANREAVE
RALVKIESAA GDRLGAPVAV RLPADNRRVA ELRAAVESGR ALRITYYSVA RDETIERVVD
PLRILVVGGR AYMEAWCRRA EGMRVFRVDR IDAVTRLAEP ARVPSQAVPH DLTGGVFRPT
ADLPLVTLRI GRSERWITEY YPCERVEPGD GEWLVSLRVT DLGWARRFVL GLGPEVTVVA
PAELATQVHA AATAALEAYA MPPPSAAADP AASTSSR