Gene Strop_2215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2215 
Symbol 
ID5058678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2507870 
End bp2508811 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content65% 
IMG OID640474478 
Producthypothetical protein 
Protein accessionYP_001159044 
Protein GI145594747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.217595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCG TATACCGAGC GAGTCGACAG TGGGAACGCA TCATTCGGCA ATGGGTCACC 
GAGGAAGCGG CGGTCGATCT CACGCACTTC AAGTCGGAGC GGCCAAACCA CAAGATGTCA
CTGTGGGACC CAGAGGTGAA CGGCGTGCGG TATCTCAAGA CGCTGGTACA CAATCTGGCA
ACCACGCTTG ATCCGGACGA CTGGGCGCGG CTGCGTCGGA CGGGCCGGCG GGAGGTGGGC
GATCCGGTCG CGGTGCGGTG GCATGGCATG CAGGTCTGCC TGGACTACCT CCAGGCCACC
CTCGAGGTCG GTTTCATCGA GCGGAGCGTC GACCTGCGGG CCGCTCGGGT GCTCGAGATC
GGAGCCGGCT ACGGGCGGAC GTGTCACACG CTGCTGTCGA ACCATGATGT CGCCGCGTAC
TGCATCGTGG ATCTGCGCAG CACCATGCGA TTCAGTCGCG GCTATCTGCG CGCGGTCCTG
GACGATGTTC AGTTCGCGAA GCTCCGCTTC GTTCCGGTGG AGGACATGGA CGTGGGACAT
GCCCTCAGCG GGATCGACTT TGACCTCGGG ATCAACATCA ACTCATTCGC CGAAATGACC
CCGGACACCG TACGCTGCTA CCTCGATCTG ATCGACCGGC GGTGCGCGGC CCTGTACGTG
AAGAACCCCG TCGGCAAGTA CCAGGATCGG AGCCTGGACG GGCACGTCGA GGGCGACGAG
GCCCGATGGC GGGCGATGGA GACCGGTCCA CTCCGCCAGG TCCTGGACAT TCACGACGAT
CAGGCGGTGC GAGCCGCCGT GCCCGGATTC CTCGCGGCCT ACCGGCCCAG TGCCGACTGG
TCTGAGGTCG CTGATGCGTG GGCAGTGCCA TGGAGCTTCT ACTGGCAGGC GTTCTACCGC
AGGAAACGAC CGGGAGCGGC GGCTGACCGG CCGGACGACT AA
 
Protein sequence
MAGVYRASRQ WERIIRQWVT EEAAVDLTHF KSERPNHKMS LWDPEVNGVR YLKTLVHNLA 
TTLDPDDWAR LRRTGRREVG DPVAVRWHGM QVCLDYLQAT LEVGFIERSV DLRAARVLEI
GAGYGRTCHT LLSNHDVAAY CIVDLRSTMR FSRGYLRAVL DDVQFAKLRF VPVEDMDVGH
ALSGIDFDLG ININSFAEMT PDTVRCYLDL IDRRCAALYV KNPVGKYQDR SLDGHVEGDE
ARWRAMETGP LRQVLDIHDD QAVRAAVPGF LAAYRPSADW SEVADAWAVP WSFYWQAFYR
RKRPGAAADR PDD