Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2125 |
Symbol | |
ID | 5058588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2403470 |
End bp | 2404447 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640474388 |
Product | hypothetical protein |
Protein accession | YP_001158954 |
Protein GI | 145594657 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.556909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0145373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCAAGC AGATGGAGGG CGACAACCAG CGCCGCCGGG CGCTGGCCCG ACAGGCTCGG AGCCAGGGGC AGCGGCCCAG CGAGACCGGG GCCAGCCTGG GCGCCACCAA GCAGCTGACC AGCCTTGACC AACGGCGGCG CAACGGACCT GCGCCAGCGG GCCGCCACAA ACCGACCAGT ACCAGCGGTG GCCCCGCCCC GCCTCCGGTC GGTACTCCGG AAAGTTCACG GCCCATTCCG GATGACGGCC GCACCGACAC CACCACGATC AGCTACCAGG ATCTGGTGAC CGATGTTGGC CGGCGGTCCG GGGTCGACTT CCCCACCGCG AAGGTGGGCG TGACGGCGAC AGTGCTGACC CTGGCCCGCG CGCTGGGGGC GACCGAACGC GGCCGGCTAC TCGCGGCCGT ACCGACCCGG CTACACGACA TCACCCCGGT GGATGGTGTC GAGGACCACT CCGACCTACC CGGCTTCCTC GCCGAGGTAG GCCGGCTCAG CGGCCGCACC CCGGAGCAGG CCCGTTACCA GGCGGCAGCC ACCCTCACCG CGCTGGCCGA CCGGGACGGC GGCCTGGTCG AGTCGCTGCA CGTCCCGGAG GGGCTGCAGG ACCTCCTCGC CCCGCCCGAG CCCGGCGGAG GCGTGATCGG AGCGACGGCC GCAACCCCGC CGCTCGACGA GGTGCAGCTG CGCGAGGTAC TCACCGGCCT CCCGTACTGG TCCGGGGACC GGCACGGGCT GTCCCGGACA GTCGCGCTGC CCGCCGAGAA CCTCGGACGC GTACTCGACC GGCTCGACCA GCTCCGACGA CAGACCGGAC GCGGGCCGTC GATTGGTCAG CCCGACCGCA CCACCGCGGT GTTGACGGTG GCGACCTCCC GGCCCCGACG GGCTCCCGAG GTAACCGGAC CGGACGTTGA CCTGGCCCAC GCCGTGGACG ACGCGATCGA CGAGGTGGGC GCCGGGATGG CTGGCTAG
|
Protein sequence | MRKQMEGDNQ RRRALARQAR SQGQRPSETG ASLGATKQLT SLDQRRRNGP APAGRHKPTS TSGGPAPPPV GTPESSRPIP DDGRTDTTTI SYQDLVTDVG RRSGVDFPTA KVGVTATVLT LARALGATER GRLLAAVPTR LHDITPVDGV EDHSDLPGFL AEVGRLSGRT PEQARYQAAA TLTALADRDG GLVESLHVPE GLQDLLAPPE PGGGVIGATA ATPPLDEVQL REVLTGLPYW SGDRHGLSRT VALPAENLGR VLDRLDQLRR QTGRGPSIGQ PDRTTAVLTV ATSRPRRAPE VTGPDVDLAH AVDDAIDEVG AGMAG
|
| |