| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2121 |
|---|
| Symbol | |
|---|
| ID | 5058584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2398808 |
|---|
| End bp | 2399398 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640474384 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001158950 |
|---|
| Protein GI | 145594653 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5502] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.277797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0126504 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATTCCT CTCGTCGGTA CAGGTCCGCG TTTGGCGCCC CTGGCCGCGG TTCGTGGCCC
GGGGCGCCCG GCCCGCCCCA CCGGTTCGAC CCGGAAAGCC CTTTCAGCCG GGAAAGCTTC
TCCGGCAGTT TCCGTACCTC GCAGGGTGGG TATCCGGTCG GTCGGACCGA AGGGGACAGC
ATGGACTATG ACACCTTTGT CGATCAGATC GCACAGCGGA CGGACACCCC TGCCGCGCAG
GCGGTGGAGT TGACCCGGGC GGTCCTGGAG ACACTCGCCG AGCGGCTGAC GGGTGGGGAG
GTGCTGGACC TGGCCGTACA GCTGCCGGCG GAGCTGCAGG GAGTGCTGAA GCCGGGGCCC
GACAACGAGG CAGCGCAGCG GCTCGGGGCG ACGGAGTTCG TCACTCGGGT GACCGACCGT
GCCCACGTCG ACGAAGCGAC TGCGCATGGT GCCGTCCGAG CGGTCTTCAC CACGCTGCGG
GAGGCGATCA GCGGTGGCGA GTTTGACGAC GTGGCGGTGC AGCTACCCCG CGACTACCGG
GAACTGGTGG AGCCGGCGCT GGCACCGGGT GCGGCGTTGC GTCGGCCCTG A
|
|---|
| Protein sequence | MDSSRRYRSA FGAPGRGSWP GAPGPPHRFD PESPFSRESF SGSFRTSQGG YPVGRTEGDS
MDYDTFVDQI AQRTDTPAAQ AVELTRAVLE TLAERLTGGE VLDLAVQLPA ELQGVLKPGP
DNEAAQRLGA TEFVTRVTDR AHVDEATAHG AVRAVFTTLR EAISGGEFDD VAVQLPRDYR
ELVEPALAPG AALRRP
|
|---|
| |