Gene Strop_2076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2076 
Symbol 
ID5058539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2349332 
End bp2350450 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content73% 
IMG OID640474339 
Productoxidoreductase FAD-binding subunit 
Protein accessionYP_001158905 
Protein GI145594608 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.439057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.29411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTGT GCCGCGACGA TCGGGTTATG ACCACCACCG TCCAGCGCCC GTCCGCGCCG 
GCGTCCCTGC GTCGCGGGTT TCTGCGGCTC GCCGCGGCGG TCACCACCCC GTTGCTGCCC
GACGACTACC TCGACCTGAT CGCCCCGCTG CGCGCCGGCA CCGACCTGCG GGGCCGGATC
GTTGAGGTGC GTCCGGAGAC CCCGGACGCC GCCACCGTCG TGATCCAGCC GGGACGAGAC
TGGCAGGGGC ACCGCCCCGG CCAGTACGTC CGGCTCGGCG TGGATGTCAA CGGCGTGCGG
CAGTGGCGGG CCTACTCGGT GACCTCCGCT CCGGGAGACC GCCACGACCC GATCACGATC
ACCGTCAAGG CGATCCCGGA CGGCCTGGTC AGCAACCATC TGGTGCGGCA CGCTCAGCCC
GGCACGATTG TGCAGCTTGA CCAGGCACAG GGCGACTTCG TGCTGCCGGC CACACCGCCG
GCGCGGGTGT TGTTGGTGAC CGCGGGCAGC GGAATCACCC CGGTCATGGG GATGCTGCGC
AGCGGGGCCC TCACGGGGTC GGATGTCACC CTGGTGCATT CGGCGCCCAC CGCGGCGGAT
GTGATCTTCG GTGGGGCGCT GCGGGAGCTG GCCGGCGCCG GCGCGCTCCG GCTGGTGGAG
CGGCACACCA GGGATGACGG CCAGCTCAGC CTCGCCGACC TGGCCGCGCT GGTGCCGGAC
CATCTCGAGC GGGAAACCTG GGCGTGCGGC CCGGCCGGGC TCCTCGACGC CCTGACCGCG
CACTGGACCG CGGTCGGCCG GGGCGAGCGA CTGCACACCG AGCAGTTCCG GCCGACCACC
ATCTCACCGG GCGAGGGCGG CACCGTCACC TTCGGCCGCA GCGGTGTGAC CGTCGCCGCC
GACGGCAGTA CCCCGCTGCT GGAGGCGGGG GAGGCGGCTG GGGTGCTCAT GCCGTCGGGC
TGCCGCATGG GCATCTGCTA CGGCTGCGTC CTGCCACTGC GCCAGGGCGC CGTCCGTGAC
CTGCGCAACG GGTCGCTCAC CACGGCGGTT CCCGGCGACG GTGTTCTCGT CCAGACCTGC
GTGTCGGCCG CCGCCGGCCC CTGCGACCTC GACCACTGA
 
Protein sequence
MPVCRDDRVM TTTVQRPSAP ASLRRGFLRL AAAVTTPLLP DDYLDLIAPL RAGTDLRGRI 
VEVRPETPDA ATVVIQPGRD WQGHRPGQYV RLGVDVNGVR QWRAYSVTSA PGDRHDPITI
TVKAIPDGLV SNHLVRHAQP GTIVQLDQAQ GDFVLPATPP ARVLLVTAGS GITPVMGMLR
SGALTGSDVT LVHSAPTAAD VIFGGALREL AGAGALRLVE RHTRDDGQLS LADLAALVPD
HLERETWACG PAGLLDALTA HWTAVGRGER LHTEQFRPTT ISPGEGGTVT FGRSGVTVAA
DGSTPLLEAG EAAGVLMPSG CRMGICYGCV LPLRQGAVRD LRNGSLTTAV PGDGVLVQTC
VSAAAGPCDL DH