Gene Strop_2065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2065 
Symbol 
ID5058528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2338437 
End bp2339279 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content65% 
IMG OID640474329 
Producthypothetical protein 
Protein accessionYP_001158895 
Protein GI145594598 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.379601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.945637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGACG TGGACACCGC GCGTTATCCA CTGGCCGCCC CCGGAAGCGA CGCATGGGAA 
CGCGTCGTCA CCAAAACCCG CACCGACCTG CGCACCCACG GTTGCAGTGT GCTGCCGGAG
TTCATTCGGC CGAGTAGCTG GGAGACGCTA CGACGGGAAG GCACCACAGT TGCCCCGTCG
GCGTACTACG ACGTTACGGA AACCAACGTC TACAACATAA AACTCGATGC CGATCTGCCA
GCTGAGCACC CAGGCCGCAT CATCATGCGA CGTGGCAACG CGTTCGTCCC GCGCGATCTG
ATCCCCACCG ACAGTCTCAT CCACCGGCTC TACCGCGATC CGTCGTTCGT ACGCTTCGTC
GCCGCCTGCT TCGAGCTCCC GGCGCTCCAC GAGCTCGCCG ACCCGCTCTC CGGCCTGGTA
CTCAACGTCG TACAACCCGG TATGGAGCAT CCGTGGCACT TCGACCTCAA CGAGTTCACC
GTCAGTCTGC TGACCCAGGA GCCGGAGGAG GGGGGTGTCT TCGAATACTG CCCGAACATC
CGTTCAGCGG GCGCGGAAAA CTTCGACGCC GTCCGTTCGG TGCTCACCGG CACAGATCGG
GCACCGGTAC GGGCCCAGAC CCTGCGCCCC GGTGACCTCC AACTGTTCAA GGGACGATAC
GCGCTACACC GGGTGAGCGC GGTACACGGG GACACCGCCC GGCACACAGC GATCTTCGCC
TACTCCCAGC GCCCCGGCGT GACGGGCAGT GTCACCCGTA CGCGACAGCT CTTCGGCCGA
GTCCTGCCCA CGCACCGCGA CGCCGAGCGT CATGCCGTTC GCGTCGACCA GCTGCTGGAC
TAG
 
Protein sequence
MHDVDTARYP LAAPGSDAWE RVVTKTRTDL RTHGCSVLPE FIRPSSWETL RREGTTVAPS 
AYYDVTETNV YNIKLDADLP AEHPGRIIMR RGNAFVPRDL IPTDSLIHRL YRDPSFVRFV
AACFELPALH ELADPLSGLV LNVVQPGMEH PWHFDLNEFT VSLLTQEPEE GGVFEYCPNI
RSAGAENFDA VRSVLTGTDR APVRAQTLRP GDLQLFKGRY ALHRVSAVHG DTARHTAIFA
YSQRPGVTGS VTRTRQLFGR VLPTHRDAER HAVRVDQLLD