Gene Strop_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2056 
Symbol 
ID5058519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2329248 
End bp2330021 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content65% 
IMG OID640474321 
Producthypothetical protein 
Protein accessionYP_001158887 
Protein GI145594590 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGG ACGACAGCTC GGATCTGCGA GCATTCGCAC ACGACTCACC TACCGAGACG 
GAGACGGCGC TACGGCTGAC GAAACTGTTG GCCACCTCGC CCATCCCGAC CGAGGAAATG
ATCAACAATT TACCGCTCTT CCTCCGCCGA CATCAGCTGA CCGACCTGCT CTCCATGGAC
GCGCTGTACC GGCAGGTCCT CGACGTGCCC GGCGTGATCA TGGAATTCGG GGTCCGGTAC
GGCCGCCACC TCGCCACCTT TGCCGCCTTA CGCGGAGTCT ACGAGCCGTA CAACCCGCTG
CGACGCATCG TTGGATTCGA CACCTTCACC GGCTTTCCCG ACCTCAACGA TGTCGACCGG
GTGGGCCCGA CCGCGTACGA GGGTCGCTTC GCCACACCGC AGGGCTACCC GGCGTACCTA
CGGGAGATCT TGGACGCACA CGAACGCAGT GAATTCTTCG GTCACGTCAC CCAACGCAGT
GTGCTGGTCC AGGGAGACGT ACGGGAGACA GTGCCGCGCT ACCTGGAGGA GAACCCACAG
ACCGTCATCG CCCTGGCCTA CCTCGACCTG GATCTGTACG AACCGACGAG GGCGGTCTTG
GAGGCCATTC GGCCGCGGCT GACCAGGGGC AGCATTGTCG CCTTCGACGA GTTGGACAAC
CCGAAGTGGC CGGGCGAAAA CGTCGCCGTG CGGGAAGTGT TCGGGCTGGA CCACGCGCCG
CTGCGGCTCC TGCCCGGCCG ACCGGCCCCG GCCTACCTAC GCTGGGGGGA CTGA
 
Protein sequence
MDKDDSSDLR AFAHDSPTET ETALRLTKLL ATSPIPTEEM INNLPLFLRR HQLTDLLSMD 
ALYRQVLDVP GVIMEFGVRY GRHLATFAAL RGVYEPYNPL RRIVGFDTFT GFPDLNDVDR
VGPTAYEGRF ATPQGYPAYL REILDAHERS EFFGHVTQRS VLVQGDVRET VPRYLEENPQ
TVIALAYLDL DLYEPTRAVL EAIRPRLTRG SIVAFDELDN PKWPGENVAV REVFGLDHAP
LRLLPGRPAP AYLRWGD