Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2021 |
Symbol | |
ID | 5058484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2292521 |
End bp | 2293591 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640474286 |
Product | hypothetical protein |
Protein accession | YP_001158852 |
Protein GI | 145594555 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3335] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.170943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.409041 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGGC TGCAACCTGT CGACCGGGTC CAGCTGACCC GGCGCCGCCG CAAGGCCCTG ACCCGAATCG CCGGGCAGTC CAGCGCACAG TTCCGGCAGG TCCGCCGGGC CCGGATCCTG CTCGCCGCCG CGAACCGGGT CCCGAACGCG CAGATCGCCC GGCAGGTCGG CTGCACGGTG GCCACCGTGC GTAAGACCCG CCGCGACTAC CGCACCCGGG GCATGCGCGC CCTTAACGAC CGGCCCCGCC CGGGACGCCC GCCGCTCTAC GACATCGACG TACACCTGCT GATCATCGCG ACCGCGACCA GTGAGCCACC CGACACCGAC GCCCAATGGA CCCACCCGCT GATCGCCGGG CACCTGCGGC AGCGGCACGG CATCGCGATC TCCGCCAGCC AGGTCGGGCG GATCCTGGCC GGTGTCGACA TCAAACCGCA CCGAGTCCGG GGCTGGCTCA ACCGGCCCGA CGATCCCGGC TTCTTCGCCC GTGCCGAGCA GATCTGCACT CTCTACCAGC ATGTTCCCGC CGGCACGGTA CTGCTCAGCG TGGACGAGAA GACCGGTATT CAGGCCAAGT CACGCCGATA CCGGACCCGC CGCGCGGGGC ACCGCCGCCC GGAACGCCGC GAGTTCGAGT ACCGCCGACA CGGCACCGTC TCACTGATGG CCGCCCTCGA CGTCTCCGAC GGCACCGTCC GGCCGAAGAT CATCGACCGC AACAACTCCG ACGCCTTCCT CGACTTCCTC ACCGAGATCG ACCTCGAAAC CCCTGCCCAC CTGCGGATTC ACCTGGTCCT GGACAACGGG TCCAGTCACA CCTCGAAAGC CACCCGGGCC TGGCTGGCCG CACGCCCGAG GTTCAGCGTG ACCTACACCC CGAAACACGC GTCCTGGCTG AACATAGTGG AACTGGTCTT CTCGATCCTG ACCCGCAGGC TACTGCGTCG CGGCGAGTTC ACCTCCCGCG AGCACCTCGC CAACAAGATC CTCAAGTTCT TCACCCACTA CAACCGGACC GCGAAACCCT TCCGCTGGAC CTACGACGGC CGCCCCCTCA AGGCCGCATG A
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Protein sequence | MARLQPVDRV QLTRRRRKAL TRIAGQSSAQ FRQVRRARIL LAAANRVPNA QIARQVGCTV ATVRKTRRDY RTRGMRALND RPRPGRPPLY DIDVHLLIIA TATSEPPDTD AQWTHPLIAG HLRQRHGIAI SASQVGRILA GVDIKPHRVR GWLNRPDDPG FFARAEQICT LYQHVPAGTV LLSVDEKTGI QAKSRRYRTR RAGHRRPERR EFEYRRHGTV SLMAALDVSD GTVRPKIIDR NNSDAFLDFL TEIDLETPAH LRIHLVLDNG SSHTSKATRA WLAARPRFSV TYTPKHASWL NIVELVFSIL TRRLLRRGEF TSREHLANKI LKFFTHYNRT AKPFRWTYDG RPLKAA
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