| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1995 |
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| Symbol | |
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| ID | 5058458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2260262 |
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| End bp | 2260909 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640474261 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001158827 |
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| Protein GI | 145594530 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.273033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGG CGGTCGTGTT CGACATCGGC GAGACGCTGC TCGACGACAC GCGCGAATGG
GCGGCGTGGG CGGACTCGAT CGGCGTCCCG CGCCACACCT TCTCCGCCGT CGTCGGCGCC
GTCGTCGCCA GCGGCCGGGA CAACAGGGAA GCCTTCGAGT ACTTCCGCCC CGGATTCGAC
CTCGAAGCCG AACGGCAAGC TCGCGAAGCC GCCGGATGCG GTCAGGTCAT CGAAGAGAGC
GACCTTTATC CCGACGTCAG ACCCGCGCTG ACAGCGCTGC GGCAGCGAGG ATTCTGGGTC
GGCGTCGCCG GAAACCAGAC CGCCAAGGTC GCCGAGCTGC TCTGGGCGAT GAACCTGCCC
GCAGACGCGA TCGCTACCTC GGGAGAGTGG GGAGTCGGCA AGCCAGACCC GGCCTTCTTC
GAACGGGTTG CGGCCATGAC GCCGGTCAAC CGGGACGAGA TCCTCTACGT CGGTGACCAC
CGCGACTATG ACATCGCTGC TGGTCGCGCT GCAGGGCTGC GTACCGCTCT CATACGCCGT
GGTCCCTGGG GCTACATGTG GCACCAGGAC GCCGATGTAC AGGTGGCCGC GGACATGGTG
GCTACTTCGT TGGAGGAGAT CGCTTCGGCG CTCACCAAGA CCGCTTGA
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| Protein sequence | MIKAVVFDIG ETLLDDTREW AAWADSIGVP RHTFSAVVGA VVASGRDNRE AFEYFRPGFD
LEAERQAREA AGCGQVIEES DLYPDVRPAL TALRQRGFWV GVAGNQTAKV AELLWAMNLP
ADAIATSGEW GVGKPDPAFF ERVAAMTPVN RDEILYVGDH RDYDIAAGRA AGLRTALIRR
GPWGYMWHQD ADVQVAADMV ATSLEEIASA LTKTA
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