Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1977 |
Symbol | |
ID | 5058440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2243775 |
End bp | 2244359 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640474244 |
Product | hypothetical protein |
Protein accession | YP_001158810 |
Protein GI | 145594513 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.158034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.883752 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACGA TTCTGCGTCG TAGCGTCCTT GGTGTTGCTG GTCTGGCCCT GTCCACCGGT GTCGTCGCCG GTCCCCTGGC CACCTACACC GACAGTGCCC CGGCTTCGGC TTCGGCCGCG GCGGTGCAGG TCGCGAAGCC GGACCTGGAC ACCCTGATCC CGCACGGCAC CCAGGGCGAG CAGTCACGGA TCAGCCTGGG TGACGAGCAG GTGTCGAACG TCAAGGCCAT CATTGAGGCC ACGAAGGCCG CCGGGATGGA CGAGCGGGCC GCCGTCGTGG CGATCGCGAC CAGTTTGCAG GAGTCGAAGC TGGAGAACCT GGGTCACCTG GGTGACCGCA ACGACCACGA CTCGCAGGGC CTGTTCCAGC AGCGCCCGTC CTCCGGCTGG GGCACGGTGG AGCAGATCAC CGACCCCGCC TACTCCACCA CCGCGTTCCT GGACGGTCTG AAGCAGGTTG AGGGTTGGCA GGAGATGCCG TTGACCGAGG CCGCCCAGAC GGTGCAGGTG TCGGCGTACC CGTTCCACTA CGCCCAGTGG GAGACCCAGG CCGCCGACCT CGTGGCCGAG CACTGGACCA GCTGA
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Protein sequence | MNTILRRSVL GVAGLALSTG VVAGPLATYT DSAPASASAA AVQVAKPDLD TLIPHGTQGE QSRISLGDEQ VSNVKAIIEA TKAAGMDERA AVVAIATSLQ ESKLENLGHL GDRNDHDSQG LFQQRPSSGW GTVEQITDPA YSTTAFLDGL KQVEGWQEMP LTEAAQTVQV SAYPFHYAQW ETQAADLVAE HWTS
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