Gene Strop_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1977 
Symbol 
ID5058440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2243775 
End bp2244359 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content68% 
IMG OID640474244 
Producthypothetical protein 
Protein accessionYP_001158810 
Protein GI145594513 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.158034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.883752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGA TTCTGCGTCG TAGCGTCCTT GGTGTTGCTG GTCTGGCCCT GTCCACCGGT 
GTCGTCGCCG GTCCCCTGGC CACCTACACC GACAGTGCCC CGGCTTCGGC TTCGGCCGCG
GCGGTGCAGG TCGCGAAGCC GGACCTGGAC ACCCTGATCC CGCACGGCAC CCAGGGCGAG
CAGTCACGGA TCAGCCTGGG TGACGAGCAG GTGTCGAACG TCAAGGCCAT CATTGAGGCC
ACGAAGGCCG CCGGGATGGA CGAGCGGGCC GCCGTCGTGG CGATCGCGAC CAGTTTGCAG
GAGTCGAAGC TGGAGAACCT GGGTCACCTG GGTGACCGCA ACGACCACGA CTCGCAGGGC
CTGTTCCAGC AGCGCCCGTC CTCCGGCTGG GGCACGGTGG AGCAGATCAC CGACCCCGCC
TACTCCACCA CCGCGTTCCT GGACGGTCTG AAGCAGGTTG AGGGTTGGCA GGAGATGCCG
TTGACCGAGG CCGCCCAGAC GGTGCAGGTG TCGGCGTACC CGTTCCACTA CGCCCAGTGG
GAGACCCAGG CCGCCGACCT CGTGGCCGAG CACTGGACCA GCTGA
 
Protein sequence
MNTILRRSVL GVAGLALSTG VVAGPLATYT DSAPASASAA AVQVAKPDLD TLIPHGTQGE 
QSRISLGDEQ VSNVKAIIEA TKAAGMDERA AVVAIATSLQ ESKLENLGHL GDRNDHDSQG
LFQQRPSSGW GTVEQITDPA YSTTAFLDGL KQVEGWQEMP LTEAAQTVQV SAYPFHYAQW
ETQAADLVAE HWTS