| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1859 |
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| Symbol | pyrF |
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| ID | 5058318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2127577 |
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| End bp | 2128413 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640474129 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001158699 |
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| Protein GI | 145594402 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAGCT TTGGCGCCCG GCTGCATCGG GTGGTCGGTG AGCGGGGTCC GCTCTGCGTG
GGCATCGACC CGCATCCGGG TCTGCTCGAG CGGTGGGGCC TCGATGACGA TGTTCGCGGT
CTGGAGCGGT TCGCGGGCAC GGTCGTGGAG GCGTTGGGCG ACCGGGTCGC GGTGGTCAAG
CCACAGTCGG CCTTCTTCGA GCGGTTCGGG TCTCGGGGCG TGGCGGTCCT TGAGTCAACT
ATCCGACAGT TGCGGACGGC TGGCTCGCTC GTCCTCCTTG ACGTCAAGCG TGGCGACATC
GGCTCGACGG TCGCCGCGTA CGCCTCCGCG TACCTTGACC CATCGAGTCC ACTGCATGTC
GACGCGGTGA CGGTGAGCCC GTATCTCGGG GTCGGCGCGC TCGCCCCGAT GTTCGAGCTG
GCCGCCGCGC AGGGCGGCGG GGTCTTCGTG CTGGCGCTCA CCTCCAATCC CGAGGGAGCC
GCGGTGCAGC GGGCTCGCAC CGCCGACGGA CGGACCGTCG CGCAGCTGGT GATCGACGAG
ATTTCCCAGC TCAACGCCGG TGCGCGACCA TTGGGCAGCG TGGGGTTGGT GGTGGGGGCG
ACCATCGGTC AGACGGGTCA CGAGCTCGCC GCGGTCAACG GTCCGCTGCT CGCTCCGGGC
CTCGGGGCGC AGGGGGCCAG CGCCGCTGAC CTACGCGTGG TCTTCGGTTC CAGCCTGCCC
GCCGTGCTCC CCACATACTC CCGTGAGGTG CTGGCTGCGG GGCCCGATGT GGTTGCCCTG
CGGGGTGCTG CGGACCGGGT GTTGGCCGAC TGTCGGGCAG CTTTGACCGG TTCGTGA
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| Protein sequence | MESFGARLHR VVGERGPLCV GIDPHPGLLE RWGLDDDVRG LERFAGTVVE ALGDRVAVVK
PQSAFFERFG SRGVAVLEST IRQLRTAGSL VLLDVKRGDI GSTVAAYASA YLDPSSPLHV
DAVTVSPYLG VGALAPMFEL AAAQGGGVFV LALTSNPEGA AVQRARTADG RTVAQLVIDE
ISQLNAGARP LGSVGLVVGA TIGQTGHELA AVNGPLLAPG LGAQGASAAD LRVVFGSSLP
AVLPTYSREV LAAGPDVVAL RGAADRVLAD CRAALTGS
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