Gene Strop_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1838 
Symbol 
ID5058297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2105997 
End bp2107259 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content74% 
IMG OID640474108 
Producthypothetical protein 
Protein accessionYP_001158678 
Protein GI145594381 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.360168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CGGCCACTGC CTCCGCCGAC CCGCGTACCC GTACCGACGG GTTGGGTTGG 
GTGACCCGGG CGGTCTTCGG TGCCGAGCGG GTCGGGCTCA CCGTGGACGG TGGGTCGCCG
GTCGGGCACC GGACGGTGGC GCGGTACGCC ATTGTGCCCT CGGTTCAGCG GGCCCGGTTT
CTGTTGCCGT TGGGCTCCCC GCGGGCAACG GCGGCGTCGC TGCTGGCGTA CAACGCGCTG
CGACCGCCTC AGGTGCGGGC CGTACGGGCA CTTCTCGGCG GGGTCGCTCG ACTCGGCGGG
ATCGAGCTGG CCCGGTTTCC GATCCTGACC GTGTCGCTTC CGGACGCGGT CGCCGCGGAG
GACGCGCTGC TCGTCCATCG ACTCGCTGCC CTACTGGGCT GGGGACCCAC CTACGCGGCG
TGCGGGGTGC GACCGCCGGA CCCGAACCAC AAGCCGACCC TGCAGCTGTT CGGCTCGGCC
GGCCGCCCGC TCGGCTTCGC GAAGATCGGC TGGAATGATG CCACCCGACT CCTGGTGACC
GCCGAGGCGG CGGCCCTGCG GGAACTCCCC GCGCTGGCTC GGGTGCCGGA CCACCCGGTG
GCGCCCCGGC TACTGGCCGA GCATCGGTGG GCCGGGCGGT CCGTCGCGTT GGTCGAGCCG
CTGCCGGCGA CTGTTCGTGG GCTGTCCACC ACCGCCGAGC CCGAGGTCGC CGCGGTGCTC
GCGGTGGCTC GCCGGGGCCG CCCGCCCGCC CGGCCCCAAC CACTGGCCGG ATCGCGCTTC
CTGACCCGGC TCACCCGGGC CGCGCACCAG GCCGCCGCTA CGATGCCAGC CGATGCCCGG
GTGGCCGTGG CGGCGGCTGA GCTCGCCTCG AGGCACGGGG ACAGCTCGGT CGAGTTCGGG
CACTGGCATG GCGACTGGGT CCCGTGGAAC CTCGGCTGGC ACGCCGATCG ATTGGTCGCC
TGGGACTGGG AGCACAGCGC GCCGGATGTC CCGCTCGGCT TCGACCTGGC GCACGACGCG
TTCCAGCGGG CCCTGGTGCT GCGGGGTGAG TCCGCCGCCA CCGCGGCCGG CGCCGTTGAT
CTCCAACTTC GACGGTACGG CGACGCGCTC GGCCTGAACC GGGCCGGGCA GCGCCTGGTG
GCCGACGCGT ACCTGCTGGA GCTGTGGTTG CGGACATGGC GTCTGGCCAA CGCCGGGGCG
GGCTGGAACC CCGCCCTGCA CCCCGCTCTG CTGGAACTCT TCGCACAGCG GTACGACCGG
TGA
 
Protein sequence
MTEPATASAD PRTRTDGLGW VTRAVFGAER VGLTVDGGSP VGHRTVARYA IVPSVQRARF 
LLPLGSPRAT AASLLAYNAL RPPQVRAVRA LLGGVARLGG IELARFPILT VSLPDAVAAE
DALLVHRLAA LLGWGPTYAA CGVRPPDPNH KPTLQLFGSA GRPLGFAKIG WNDATRLLVT
AEAAALRELP ALARVPDHPV APRLLAEHRW AGRSVALVEP LPATVRGLST TAEPEVAAVL
AVARRGRPPA RPQPLAGSRF LTRLTRAAHQ AAATMPADAR VAVAAAELAS RHGDSSVEFG
HWHGDWVPWN LGWHADRLVA WDWEHSAPDV PLGFDLAHDA FQRALVLRGE SAATAAGAVD
LQLRRYGDAL GLNRAGQRLV ADAYLLELWL RTWRLANAGA GWNPALHPAL LELFAQRYDR