Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1838 |
Symbol | |
ID | 5058297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2105997 |
End bp | 2107259 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640474108 |
Product | hypothetical protein |
Protein accession | YP_001158678 |
Protein GI | 145594381 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.360168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC CGGCCACTGC CTCCGCCGAC CCGCGTACCC GTACCGACGG GTTGGGTTGG GTGACCCGGG CGGTCTTCGG TGCCGAGCGG GTCGGGCTCA CCGTGGACGG TGGGTCGCCG GTCGGGCACC GGACGGTGGC GCGGTACGCC ATTGTGCCCT CGGTTCAGCG GGCCCGGTTT CTGTTGCCGT TGGGCTCCCC GCGGGCAACG GCGGCGTCGC TGCTGGCGTA CAACGCGCTG CGACCGCCTC AGGTGCGGGC CGTACGGGCA CTTCTCGGCG GGGTCGCTCG ACTCGGCGGG ATCGAGCTGG CCCGGTTTCC GATCCTGACC GTGTCGCTTC CGGACGCGGT CGCCGCGGAG GACGCGCTGC TCGTCCATCG ACTCGCTGCC CTACTGGGCT GGGGACCCAC CTACGCGGCG TGCGGGGTGC GACCGCCGGA CCCGAACCAC AAGCCGACCC TGCAGCTGTT CGGCTCGGCC GGCCGCCCGC TCGGCTTCGC GAAGATCGGC TGGAATGATG CCACCCGACT CCTGGTGACC GCCGAGGCGG CGGCCCTGCG GGAACTCCCC GCGCTGGCTC GGGTGCCGGA CCACCCGGTG GCGCCCCGGC TACTGGCCGA GCATCGGTGG GCCGGGCGGT CCGTCGCGTT GGTCGAGCCG CTGCCGGCGA CTGTTCGTGG GCTGTCCACC ACCGCCGAGC CCGAGGTCGC CGCGGTGCTC GCGGTGGCTC GCCGGGGCCG CCCGCCCGCC CGGCCCCAAC CACTGGCCGG ATCGCGCTTC CTGACCCGGC TCACCCGGGC CGCGCACCAG GCCGCCGCTA CGATGCCAGC CGATGCCCGG GTGGCCGTGG CGGCGGCTGA GCTCGCCTCG AGGCACGGGG ACAGCTCGGT CGAGTTCGGG CACTGGCATG GCGACTGGGT CCCGTGGAAC CTCGGCTGGC ACGCCGATCG ATTGGTCGCC TGGGACTGGG AGCACAGCGC GCCGGATGTC CCGCTCGGCT TCGACCTGGC GCACGACGCG TTCCAGCGGG CCCTGGTGCT GCGGGGTGAG TCCGCCGCCA CCGCGGCCGG CGCCGTTGAT CTCCAACTTC GACGGTACGG CGACGCGCTC GGCCTGAACC GGGCCGGGCA GCGCCTGGTG GCCGACGCGT ACCTGCTGGA GCTGTGGTTG CGGACATGGC GTCTGGCCAA CGCCGGGGCG GGCTGGAACC CCGCCCTGCA CCCCGCTCTG CTGGAACTCT TCGCACAGCG GTACGACCGG TGA
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Protein sequence | MTEPATASAD PRTRTDGLGW VTRAVFGAER VGLTVDGGSP VGHRTVARYA IVPSVQRARF LLPLGSPRAT AASLLAYNAL RPPQVRAVRA LLGGVARLGG IELARFPILT VSLPDAVAAE DALLVHRLAA LLGWGPTYAA CGVRPPDPNH KPTLQLFGSA GRPLGFAKIG WNDATRLLVT AEAAALRELP ALARVPDHPV APRLLAEHRW AGRSVALVEP LPATVRGLST TAEPEVAAVL AVARRGRPPA RPQPLAGSRF LTRLTRAAHQ AAATMPADAR VAVAAAELAS RHGDSSVEFG HWHGDWVPWN LGWHADRLVA WDWEHSAPDV PLGFDLAHDA FQRALVLRGE SAATAAGAVD LQLRRYGDAL GLNRAGQRLV ADAYLLELWL RTWRLANAGA GWNPALHPAL LELFAQRYDR
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