| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1696 |
|---|
| Symbol | |
|---|
| ID | 5058155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1939671 |
|---|
| End bp | 1941080 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640473968 |
|---|
| Product | ATPase domain-containing protein |
|---|
| Protein accession | YP_001158538 |
|---|
| Protein GI | 145594241 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.862129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCAGCT ATCTGCTGCT GATGGTGCTG GTCCTGGTTG CCCTGGAGAC CCCGCTCGCA
GCCACCCTGG CCAGCCGGGA GACCGAACGG GTCCGCGCCG ACCGGCTCGC CGACGCCACC
CGCTTCGCGT CGTTGGCCGA TGTGGCGCTG CGGGGCGGCA GTCCCGGCCC GATCGGCAGC
GAGTTGGACC GCTACGACGA GCTCTATGGC ATCGGCGCCG CGGTCGTTGA CCGGGACCGG
GGAACGGTAG TCGCGTCGCC GAGCTGGCGA CCCGCCCCGG GCACCCGGGG GGCGCTCGAC
GTGGCGCTCG CCGGGCAGCA GGCCAGCGGG CCCGACTCGG TGCTGCCGTG GGTGGACGGA
CCGATCGTCG TCGCGGTGCC GATCAACGAC GGCGGCGAGG TGCTCGGCGC GGTGGTCACC
ACCACCCCCG CCGACGGCGT CCGGGAGGCC GTCACCATCT GGTGGCTGCT GCTCGCCGGT
GCCGGCCTAC TCGCGGTGCT GGCCTGTGTC TCGACCGCGT TCGCCCTGGC CGGGTGGGTG
CTGCGCCCGG TCACCGAGCT GGACGTGGTC ACCCATGAGA TCGCCGAGGG CGACCGGAGC
GCCCGCGTGC AGCATCGGCA GGGCCCTCCC GAACTGCGTC GCCTGGCGGC GAGCTTCAAC
CACATGACCG ACGCCGTCTC CGACGTGCTG GACCGGCAGC GGGCGTTCGT GGCGCACGCC
AGCCACCAGC TCCGCAACCC GTTGACCGCG CTGCGCCTGC GGGTTGAGGA GCTGGGGCCC
AGCCTGGGCG ACCCGCAGGG CCAGGCCGAG CACCAGCTCG CCCTGGCCGA GACCGACCGG
CTGGCGCTTG TGCTGGATGC TCTGCTCACC CTGGCCCGGG CCGAGCGGAC GGAGAACCTG
CGCCTGACCG TTGACGCGGC GGCGGTCGCC GCGAGCCGGG TGGCGGCGTG GGAGCCGTTG
GCGCGCCGCC GGTCGATCAC GCTGCGTCTG GATACCGAGG CTGCACCGGC GTACGCGAGG
ACCGTGCCGA CCGCTGTTGA CCAGGCGCTT GACGCGCTGA TCGACAACGC GGTGAAGTTC
AGTGGCGCGG GGGGCGAGGT GACCGTGGAG GTTCGGGGCC GGGACGACGG GACGACGCTG
CGGGTACGCG ACACCGGCCC GGGCATGACG GCCAGCCAGC TCGACCAGGC GACCGAACGG
TTCTGGCGGG CGCCGGAGGC ACAGAACATT GACGGTGCCG GGCTGGGTCT GGCCATCGTC
GCCGTCCTGG TGGACGCCTC CGCCGGGCGG CTCAGTATGT ATCCGAACGG ACCCCGCGGC
CTGATCGCGG CCCTCTGGTT CCCCGCGTCG CTGCCCCTCC CCGCCGACGA CGGAGCGCAG
GAAGCGTCCA GCCCTTCTGC TCGGTGCTGA
|
|---|
| Protein sequence | MISYLLLMVL VLVALETPLA ATLASRETER VRADRLADAT RFASLADVAL RGGSPGPIGS
ELDRYDELYG IGAAVVDRDR GTVVASPSWR PAPGTRGALD VALAGQQASG PDSVLPWVDG
PIVVAVPIND GGEVLGAVVT TTPADGVREA VTIWWLLLAG AGLLAVLACV STAFALAGWV
LRPVTELDVV THEIAEGDRS ARVQHRQGPP ELRRLAASFN HMTDAVSDVL DRQRAFVAHA
SHQLRNPLTA LRLRVEELGP SLGDPQGQAE HQLALAETDR LALVLDALLT LARAERTENL
RLTVDAAAVA ASRVAAWEPL ARRRSITLRL DTEAAPAYAR TVPTAVDQAL DALIDNAVKF
SGAGGEVTVE VRGRDDGTTL RVRDTGPGMT ASQLDQATER FWRAPEAQNI DGAGLGLAIV
AVLVDASAGR LSMYPNGPRG LIAALWFPAS LPLPADDGAQ EASSPSARC
|
|---|
| |