| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1681 |
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| Symbol | |
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| ID | 5058140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1919157 |
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| End bp | 1921640 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640473953 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_001158523 |
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| Protein GI | 145594226 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.638406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCC GCAAGGGCCC GAAGGTCGAC CTGTCCGCGT TCGACCAGGC GGGTGCACGG
GTTTTCGACA ATCCGCTGGT CACCGAGGTC TCCGACTCCT ACCTGGAGTA CGCGTTCTCG
GTCATCCACT CCCGCGCCCT GCCGGACGCC CGAGACGGGC TCAAGCCGGT GCACCGGCGC
ATCCTCTGGT CGATGTACGA ATCCGGCCAC CGCCCGGACC GGGGGCACGT CAAGTCCGCG
CGGGTGGTCG GCGACGTGAT GGGCAAGTAC CACCCCCACA GCGACGTGGC GATCTATGAC
GCGTTGGTCC GGCTGGCACA GGACTTCTCC CTGAACGCGC CCCTCATCGA CGGGCACGGC
AACTTCGGAA GCCCGGACGA CGGTCCGGCC GCGGCCCGAT ACACCGAAGC CCGGATGTCG
CGGGAGGCGA TGCTGCTCGT CGGTGAGTTG GGCGAGGAGA CAGTCGACCT GGGGCCGAAC
TACGACGGTT CGTTGACCCA GCCCACCGTG CTGCCGGCGG CCTTCCCGAA CCTGCTGGTC
AACGGCGCCT CGGGGATCGC GGTCGGGATG GCGACCAACA TGATCCCGCA CAACCTGGGC
GAGGTGGTCT CCGCCGCCCG CTGGCTGATC AACCACCCGG ACGCCACGCT GGACAAGCTG
ATGGAGTTCG TTCCGGGGCC GGATCTGCCG ACCGGCGGTC TGCTGCTCGG CCTGGACGAG
GTGCGGCGGG CATACGAGAC CGGCCGAGGT GTGGTGCGGA TGCGCGCCAA GGTGGAGATC
GGCCCGATTG AGGGCAGCCG TGGTCGGCAG GCGATCACCG TTGTCGAGCT GCCCTACGGC
ATCGGCGCCG AGAAGGTCAT CGCCGCCGTC ACCAACGAGG TCACGAAGAC CAAACGGCTC
ACCGGGATCG CCGATGTCAA GGACCTCACC GACCGGGAGA ACGGCACCCG GCTGGTCATC
GAGTGCAAGG TCGGAGTGAA TCCGCAGGCG CTCCTCGCCG ATCTCTACCG GCTGACCCCG
CTGGAGCAGT CGTTCGGCGT CAACAATCTG GTGCTGGTGG ACGGGCAGCC GCGGACCCTG
GGGCTCAAGG CCCTACTGGA GGTCTTCCTG GCCCACCGGT ACGAGGTGGT GACCCGGCGC
AGCGCGTACC GGAAGCGTCG GCGGGAGGAG CGGCTGCACC TGGTGGACGG GCTGCTGGTC
GCGCTGCTCG ACATCGACCA GGTCGTCAAG CTGATCCGGG GCAGCGAGGA CGCGCAGGCC
GCGAAGGACG GTCTCATGCG GCGCTTCGGG CTCTCCGAGA TCCAGGCGAC CTACATCCTC
GACACACCGC TGCGCCGGCT CACCAGGTAC GACCGGTTGG AGCTGGAGGC CGAGCAGGAG
AAGCTGCGCG GCGAGATCAC TGAGCTGTCC CGGCTCCTGG ACGACCCGAA GGTCCTGCGG
AAGGTCGTCT CCACCGAACT GGCCGCGGTG GTGAGGCAGT TCGCGGCGCC GCGCCGCACC
ACCTTGGTCG ACGGGGATCT GAAGGAGGTG CTCGCCGCGT CCGTGCCGGC CGGCCCACTG
GAGGTCGCCG ACGATCCCTG CCAGGTGATC CTCTCGTCGA CCGGACTGGT CGCCCGGACC
GCCGCCGAGT CGGAGGAGGC GGTCGAGGGA CATCGCCGGC ATGGCCGGGT CCGGCACGAC
GCGGTACGCG CCGTCGCCCA CTCCACGGCC CGCGGCAAAG TTCTGCTGGT CACCAGTGGC
GGCCGGGCGT TCAAGGTGGA CGTGCTGCCG CTGCCGGTGC TACCCGATCA GTCCGGCACG
GTCTCCCTGC GCGGCGGGAT GTCCGCAGCC GAGTTGGTGC CGCTGGCGCC GGGGGAGACG
GTGGTCGGGA TCGCGCCGCT CGGTGCGCCC GCGGAGGGAT CGCCGGGGCT GGCCCTCGGC
ACCCGGCAGG GCATGGTGAA GGTCTGTGCG CCGGACTGGC CGGTGCGCGC CGACGAGTTC
GAAGTGATCA GCCTCCGCGA TGGGGACGAG GTGGTCGGGA CCACCTGGCT GACCGACGGC
GCCGAGAGCC TCGCCTTCGT CACCTCGGAG GCGTCGTTGC TGCGTTACCC GGTGGGGTTG
GTCCGTCCGC AGGGGCTGCG GGGCGGTGGT GTCGCCGGGG TGAGCCTCCC CGGGGACGCG
CGAGTGGTCT ATTTCGGCGC GGTCCGCACC GACGACCCCG CCCACGGTGA GCCGATGGTG
GTCACCTCGA CCGGCGCCAC GGTGAAGGTG ACGCCGTTTG CGGCCTACCC GGCGAAGGGG
CGGGCGACGG GCGGCGTGCG CTCCCAGCGT TTCCTCAAGG GGGAGACGGA GGCGGCCGTT
GCCTGGGTCG GCCCGCGTCC GGTCGGTGCG ACGGCGAACG GCGAGCCGGT GGAACTGCCG
GCGGCTGACC CGCGCCGCGA CGGCAGCGGT TTCGCTGTGC TGCTCGGCCC CGCCGTCATC
GGCCATCAGA TCGACCGCGA CTGA
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| Protein sequence | MARRKGPKVD LSAFDQAGAR VFDNPLVTEV SDSYLEYAFS VIHSRALPDA RDGLKPVHRR
ILWSMYESGH RPDRGHVKSA RVVGDVMGKY HPHSDVAIYD ALVRLAQDFS LNAPLIDGHG
NFGSPDDGPA AARYTEARMS REAMLLVGEL GEETVDLGPN YDGSLTQPTV LPAAFPNLLV
NGASGIAVGM ATNMIPHNLG EVVSAARWLI NHPDATLDKL MEFVPGPDLP TGGLLLGLDE
VRRAYETGRG VVRMRAKVEI GPIEGSRGRQ AITVVELPYG IGAEKVIAAV TNEVTKTKRL
TGIADVKDLT DRENGTRLVI ECKVGVNPQA LLADLYRLTP LEQSFGVNNL VLVDGQPRTL
GLKALLEVFL AHRYEVVTRR SAYRKRRREE RLHLVDGLLV ALLDIDQVVK LIRGSEDAQA
AKDGLMRRFG LSEIQATYIL DTPLRRLTRY DRLELEAEQE KLRGEITELS RLLDDPKVLR
KVVSTELAAV VRQFAAPRRT TLVDGDLKEV LAASVPAGPL EVADDPCQVI LSSTGLVART
AAESEEAVEG HRRHGRVRHD AVRAVAHSTA RGKVLLVTSG GRAFKVDVLP LPVLPDQSGT
VSLRGGMSAA ELVPLAPGET VVGIAPLGAP AEGSPGLALG TRQGMVKVCA PDWPVRADEF
EVISLRDGDE VVGTTWLTDG AESLAFVTSE ASLLRYPVGL VRPQGLRGGG VAGVSLPGDA
RVVYFGAVRT DDPAHGEPMV VTSTGATVKV TPFAAYPAKG RATGGVRSQR FLKGETEAAV
AWVGPRPVGA TANGEPVELP AADPRRDGSG FAVLLGPAVI GHQIDRD
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