| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1642 |
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| Symbol | |
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| ID | 5058101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1870211 |
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| End bp | 1872205 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640473915 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001158485 |
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| Protein GI | 145594188 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0265389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.832187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGA CGACCATGAC CGGCTCGTCG ACGCGGACCA CCCCACGTCG ACGAATCACC
AAGCCGCTGG CGGTGGTGGG TGTCCTCGTC TTCTGGCTTG TCGCCTGGAC CCTGCTGCGC
GGCCAGGACA TGTTGGAACT GCCCCGGGCC ACGCTGACCG ATCTGCATCA CTGGCTTAAC
GACGTCAACG ACTCGGTCGG GGCCAGCCGG AACAGCAGCC CGATCTTCCT GTACTTCTTC
AACGAGATCC GCGCGGTGAT GGACGCGCTG GTGACCTTCG TCCAGGGGCT CATCGCGCAA
CCGGCGTACG GACGGCCGGT GCCGGTGCTC GGGTGGCTGG GTGTGGTCGC GCTGGTCTCC
TACGTCTCCT GGGCGTTCGC CAACTGGCGG GTGGGGCTGC TCGCCGCGGG CGGGTTCACT
CTCTTCGGCC TGCAGGGGCT GTGGCAGGAG AGCATGGACA CGCTGGCGCT GACGTTGGTG
GCGGTCTTCG TGTCGCTGTT GTTCGGCATT CCGCTGGGCA TTCTGGCCGG GGTGTCGGAC
CGGTTCCACC GGATGATCAC CCCGGTGTTG GACCTCATGC AGACGATGCC CACCTTCGTC
TACCTCGCGC CGCTGACCCT GGTCTTCCTG ATCGGCCCAG CCTCCGCGAC GATCGCGACC
CTGATCTACG CCATGCCGCC GGCGATCCGG ATCACCGCGC ACGGAATCCG TTCCGTGCCG
GCACCGCCGG TGGAGGCCAC CGACTCGTTC GGGGCGACCC GGCGGCAGCG GCTGACCAAG
GCGCTCCTGC CGCTGTCGAA GCGGACGATC GTGCTCGGCG TCAACCAGAC GATCATGGCG
GCGTTGGCGA TGGTGACCGT CGCGGCCCTG ATCGACGCTC CCGGCCTCGG CAAGACAGTG
ATCAAGGCTC TGCAGACCAC CGATGTCGGT ACCGCGTTCA ACGCGGGTGT CGCGATCGTG
GTGATGGCTA TTGTCCTGGA CCGGGTCACC ACGGCGGCCA GCATCCGCGC CGAGCAGGGT
GGCGGCGAGT CCAGTCCGCG GATCCGCCGG CTGCTCCTGG CCGGGTTCGG GCTGGTCGCA
GCGGTCTGCT CGTACCTGTC CTACACCTAC CTGTGGGCCT CCGAGTTCCC GGATGGCGGC
CAACTCGGCG AGTACCTGTC GCAGGGGGCG ACCGCGGTGA CGACGTGGGC ACAGAACAAC
CTCTCGGACG TTACCGCGGC GGTGAAGGAC GGCGTGACCA TCGCGTTGCT CAACCCGTTG
GAGGCGCTGC TGGCGGAGTC GCCGTGGTGG TTGATGGGTG CGGTGATCGT GGTGCTCGCC
GCGCTGATCG GCAACCTGCG CACCGCTGCC GTCGCCGCGG TCTGTGTGGG GCTGCTGGTC
GGCAGCGGGC TCTGGAACGC CAGCATGATC ACTCTTGCCA TGACGCTCGT GGCCACGCTG
TTGGTCGTGA CGCTGGGAGT GGTTGTCGGT GTGTGGATGG GCAGGAGTAG CCGGGCCGAC
CGGATCATCC GGCCGGTCCT GGACGCCGGG CAGACCATGC CGGCCTTTGT CTACCTGATC
CCGGTCGTAG CGCTCTTCTC GGTGAGCCGC TTCAGCGCGA TCGTCGCCGG TGTCGTCTAC
GCCGCGCCGG TTGCTATCAA GATCGTCGCA GATGGGGTAC GTGCCATTCC GGAGTCGACG
GTGGAGGCGG CTACCGCCGC GGGCTCCAAC AGCTGGCAGA CCATCACGAA GGTCCAGCTG
CCGATGGCGC GGCAGTCGCT GATGCTCGCC ACCAACCAGG GGCTTATCTA CGTGCTGTCG
ATGGTGGTCA TCGGCGGCCT GGTCGGGGCC GGTGCGCTCG GCTACGAGGT CGTCGCCGGC
TTCTCGCAGG GGCAGCTCTA CGGCAAGGGC CTGGCGGCTG GAGTCGCCAT CGTCGTACTC
GGGATCATGC TCGACCGGAT CGCGCGGGCC GCCGCGCAAC GGTCGGACCG CGCTTTCGCC
GCCACCCAGA CGTGA
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| Protein sequence | MATTTMTGSS TRTTPRRRIT KPLAVVGVLV FWLVAWTLLR GQDMLELPRA TLTDLHHWLN
DVNDSVGASR NSSPIFLYFF NEIRAVMDAL VTFVQGLIAQ PAYGRPVPVL GWLGVVALVS
YVSWAFANWR VGLLAAGGFT LFGLQGLWQE SMDTLALTLV AVFVSLLFGI PLGILAGVSD
RFHRMITPVL DLMQTMPTFV YLAPLTLVFL IGPASATIAT LIYAMPPAIR ITAHGIRSVP
APPVEATDSF GATRRQRLTK ALLPLSKRTI VLGVNQTIMA ALAMVTVAAL IDAPGLGKTV
IKALQTTDVG TAFNAGVAIV VMAIVLDRVT TAASIRAEQG GGESSPRIRR LLLAGFGLVA
AVCSYLSYTY LWASEFPDGG QLGEYLSQGA TAVTTWAQNN LSDVTAAVKD GVTIALLNPL
EALLAESPWW LMGAVIVVLA ALIGNLRTAA VAAVCVGLLV GSGLWNASMI TLAMTLVATL
LVVTLGVVVG VWMGRSSRAD RIIRPVLDAG QTMPAFVYLI PVVALFSVSR FSAIVAGVVY
AAPVAIKIVA DGVRAIPEST VEAATAAGSN SWQTITKVQL PMARQSLMLA TNQGLIYVLS
MVVIGGLVGA GALGYEVVAG FSQGQLYGKG LAAGVAIVVL GIMLDRIARA AAQRSDRAFA
ATQT
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