| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1612 |
|---|
| Symbol | |
|---|
| ID | 5058071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1831994 |
|---|
| End bp | 1832506 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640473885 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001158455 |
|---|
| Protein GI | 145594158 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2210] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCC AGGCCGCACC CGCGATCGTC CCGAACTTCG ACGACGACCG GAGCACCGAT
CGCAAACTCG CCATCATCTG CTCCAAAGGC AATCTCGACA TGGCCTACCC TGGCCTCATC
CTCGCCAACG CCGCCCTGGG CGAAGGCGTC GAGACCCACC TGTTCTTCAC CTTCTGGGGC
TTCGACATGA TTACCAAGTC GAGGATGGGC GACCTGAAGT TCACGATGCT GGGCAACACC
GCCACCCACC TGCCGCAAGG CATCGGCGGT CTGCCCGGGA TGACCGCGAT GGCCACCCAC
CAGATGAAAA AGCAGATCGC CGAGGTCGGC GTCCCCGAGG TGCCCGAGTT CCTGGAGCAG
ATCGTCGCCT CCGGCGGGCA CCTGTGGGCC TGCCGGATGT CCGCCGACAT GATGCACCTG
GCCAAGGACG ACCTGTATGA GGGCGTCGAG GACATCATCA ACGCTGCTGA CTTCATCGAG
AAGACCGACG GCGCCCAACT GCTGTTCATC TAG
|
|---|
| Protein sequence | MTTQAAPAIV PNFDDDRSTD RKLAIICSKG NLDMAYPGLI LANAALGEGV ETHLFFTFWG
FDMITKSRMG DLKFTMLGNT ATHLPQGIGG LPGMTAMATH QMKKQIAEVG VPEVPEFLEQ
IVASGGHLWA CRMSADMMHL AKDDLYEGVE DIINAADFIE KTDGAQLLFI
|
|---|
| |