Gene Strop_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1573 
Symbol 
ID5058026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1786951 
End bp1787619 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content75% 
IMG OID640473841 
Productmethyltransferase type 12 
Protein accessionYP_001158417 
Protein GI145594120 
COG category[R] General function prediction only 
COG ID[COG3897] Predicted methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.973711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGAAC TCGCCACCGC CTTCGTCCGA CTGCACGCCC GGCTCACGCC GGTCGCCTTC 
GTCCCCGAGG TACGACTCCA CCAGGCCGAC GACGCGGTCG GGCTCTGGGA ACTGACCGAG
GGTGAGTTCC GCAGTGACCA ACCGCCCCCC TTCTGGGCCT TCGCCTGGGC CGGCGGGCAG
GCCCTCGCCC GATACGTCAC CGACCACCCC GACCTGGTCG CCGGTCGGCG AGTTCTCGAC
CTGGCCGCCG GCTCGGGTCT GGTGGCCATC GCCGCGGCCC GCGCCGGCGC CACCGCCGTC
CGCGCGGTCG AGGTCGACCC GCTGGCCGTC GCGGCCGTCG CCGTCAACGC CGAGGCCAAC
GGGGTACGCC TCGACGCCGA GCTGGCCGAC ATCCTCGACG GCGACGCGGG CGACGCCGAG
GTCGTCCTCG CCGGCGACGT GTTCTACAGC GCGGCGATGG CGAGGCGCAT GCTCCGCTTC
CTGCTCACCG CCGCCCGCGC GGGGGCCACG GTGCTGGTCG GCGACCCCGA CCGCGCGTTC
CTGCCCCGCG ACCGCTTCGA CCCGGTGGCC AGCTACGAGG TGCCGGTGCC CGAGACGCTG
GAAAGCGTAC GCGTGAAGCG TGCCACGGTG TGGCGACTGC GAGCCAGGCT GCCCGGAACG
GCCCGCTAG
 
Protein sequence
MSELATAFVR LHARLTPVAF VPEVRLHQAD DAVGLWELTE GEFRSDQPPP FWAFAWAGGQ 
ALARYVTDHP DLVAGRRVLD LAAGSGLVAI AAARAGATAV RAVEVDPLAV AAVAVNAEAN
GVRLDAELAD ILDGDAGDAE VVLAGDVFYS AAMARRMLRF LLTAARAGAT VLVGDPDRAF
LPRDRFDPVA SYEVPVPETL ESVRVKRATV WRLRARLPGT AR