Gene Strop_1539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1539 
Symbol 
ID5057992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1749502 
End bp1750083 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content72% 
IMG OID640473807 
Productredoxin domain-containing protein 
Protein accessionYP_001158383 
Protein GI145594086 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.482949 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.281635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCA GCACCCGGTT AATCCCTATC GCACTGACCA TCGTCCTGGC GCTCGCCGCC 
TGCGGGAACT CCGGCGACGA ATCCGCGAAT GCCGACCCCA CCCCCGCCCC GACGACCGCA
TCCACCAGCG CGCCCGCCAG CACGGCGGCG AGCCCGACCG GCGAGACGGC ACCCGAGGTG
CCGCAGACCC TCGACTTCAC CGCGCGCACC ATCGACGGTG ACACGTTCAC CGGGGCCAGC
CTCGCCGGCA AGCCGACCGT GCTCTGGTTC TGGGCCGCCT GGTGCCCCAC GTGCCGGGGC
GCGGCCAAAT CGGTGGCGGC CGTGCAGCAG GACAACGCCG ACCGGGTGAA CGTGGTCGGG
GTGGCCGGGC TCGGCAGCGG TGACGACGCG ATGCGCCGAT TCGCCCAGGA CACCGGCATC
CAGGGCTTCC CGCACCTGGC CGACGACGCG GGCGAGGTGT GGCAGCGGTT CGAGGTGGTC
TCGCAGGAGC ACTACGTGCT GCTGGACTCC ACCGGCACGG TCGTCCACAA CGGTCCCCTC
TCCCAGACCG ACCTCCGCGA GCGGGTCGCG GAGCTGACCT GA
 
Protein sequence
MPTSTRLIPI ALTIVLALAA CGNSGDESAN ADPTPAPTTA STSAPASTAA SPTGETAPEV 
PQTLDFTART IDGDTFTGAS LAGKPTVLWF WAAWCPTCRG AAKSVAAVQQ DNADRVNVVG
VAGLGSGDDA MRRFAQDTGI QGFPHLADDA GEVWQRFEVV SQEHYVLLDS TGTVVHNGPL
SQTDLRERVA ELT