Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1539 |
Symbol | |
ID | 5057992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1749502 |
End bp | 1750083 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640473807 |
Product | redoxin domain-containing protein |
Protein accession | YP_001158383 |
Protein GI | 145594086 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.482949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.281635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCA GCACCCGGTT AATCCCTATC GCACTGACCA TCGTCCTGGC GCTCGCCGCC TGCGGGAACT CCGGCGACGA ATCCGCGAAT GCCGACCCCA CCCCCGCCCC GACGACCGCA TCCACCAGCG CGCCCGCCAG CACGGCGGCG AGCCCGACCG GCGAGACGGC ACCCGAGGTG CCGCAGACCC TCGACTTCAC CGCGCGCACC ATCGACGGTG ACACGTTCAC CGGGGCCAGC CTCGCCGGCA AGCCGACCGT GCTCTGGTTC TGGGCCGCCT GGTGCCCCAC GTGCCGGGGC GCGGCCAAAT CGGTGGCGGC CGTGCAGCAG GACAACGCCG ACCGGGTGAA CGTGGTCGGG GTGGCCGGGC TCGGCAGCGG TGACGACGCG ATGCGCCGAT TCGCCCAGGA CACCGGCATC CAGGGCTTCC CGCACCTGGC CGACGACGCG GGCGAGGTGT GGCAGCGGTT CGAGGTGGTC TCGCAGGAGC ACTACGTGCT GCTGGACTCC ACCGGCACGG TCGTCCACAA CGGTCCCCTC TCCCAGACCG ACCTCCGCGA GCGGGTCGCG GAGCTGACCT GA
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Protein sequence | MPTSTRLIPI ALTIVLALAA CGNSGDESAN ADPTPAPTTA STSAPASTAA SPTGETAPEV PQTLDFTART IDGDTFTGAS LAGKPTVLWF WAAWCPTCRG AAKSVAAVQQ DNADRVNVVG VAGLGSGDDA MRRFAQDTGI QGFPHLADDA GEVWQRFEVV SQEHYVLLDS TGTVVHNGPL SQTDLRERVA ELT
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