| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1511 |
|---|
| Symbol | |
|---|
| ID | 5057964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 1723108 |
|---|
| End bp | 1723599 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640473779 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001158355 |
|---|
| Protein GI | 145594058 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1510] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.523376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00417665 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCCGA ACCAAACAAG CCTTACAGTG GAGCTCGACC CGCCCCAGCG GGAGTGGGTC
GAGGCGATCG GATTGTTCCT CGAACGCTCG GGGTTCCCGC CCAGCTCGGC GCGGATCTAC
GGACTGCTGC TGATGTCGGC TGAGCCCGAG CTGTCCTTCG AGGATCTGGT GTCCACGCTT
GGCTTCGGGA AGGCCGCCGT CAGCACGGGC CTACGCCGTT TGCAGGAGAC CAATCGCATC
AGTGAGCGCA CCCGGCCGGG TGAACGGCGA CGCTACTTCC GGGCACGACT GGGGCCCGAG
ATCGGCGTCG ACCGCTTCCG TGCCTTCAGC TCCGCGCTGT GTGACCTGCT GGAGAAAGGG
GTCGCCCTTC GGGGCAGCAG AGCCGATGCC GAGATCACCG CCGACCTCGA GGCATCGGTA
AGGTTCCTTC GCTTTCTCGA CGCGGAGCTG GGCGGGCTGC GGGCACGGTG GGAGGCGAAC
GGTGATGGCT GA
|
|---|
| Protein sequence | MVPNQTSLTV ELDPPQREWV EAIGLFLERS GFPPSSARIY GLLLMSAEPE LSFEDLVSTL
GFGKAAVSTG LRRLQETNRI SERTRPGERR RYFRARLGPE IGVDRFRAFS SALCDLLEKG
VALRGSRADA EITADLEASV RFLRFLDAEL GGLRARWEAN GDG
|
|---|
| |