Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1484 |
Symbol | |
ID | 5057937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1692186 |
End bp | 1692857 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640473752 |
Product | hypothetical protein |
Protein accession | YP_001158328 |
Protein GI | 145594031 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.205776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACGG GACAACGCCC AACGGCGCAG CCGGGCACGG GAGAGGAGGA ACCGCTCCCC ACCATCGCCG AGCAGATGGC CGACCAGCTG GGGGGCTGGC GCGGGCTGCT GGAGTCGAGC ATTCCGGTGG TCGTCTTCGT GGTCGCCAAC ATCATCGGTG AGCTGCGTCC GGCGGTGATA GCCGCGGTGG CGGTCGCGGT GTTCATCGCG GCCCTGCGTC TGGCCCAGCG GCGACCGGTG CGGCACGCGG TGAACGGGCT GTTCGGCATC GCGATCGGCG CGGCGATCGC CTGGCGCACC GGCAATGAGC GGGACTTCTA CCTGCCCGGC ATCCTCTACG GCATGGGCTA CGGCGTGGTG CTGTTGCTCT CGGCGGCGAT CCGGCAGCCC CTGGTGGGCT GGATCTGGTC GGTTCTGGTG GCCAAGGGCG CCTCCGACTG GCGTCAGGAT CCGCTCCTGG TGCGGACCTT TACCCGGCTG ACCGTGCTCT GGGGGGTGGT CTGGCTGGCG AAGGTCGGGG TGCAGGCTGG GCTCTACCTT GCTCACCAGG ACACCGCGCT CGGCGTCGCC CGGCTCCTGC TCGGCTACCC GCCGTACGTG CTGCTCCTGC TGATCACGGT CTGGACGGTG CGTCGGGTGA CCCGGCACAC ACCCCAGACC CCGGTCGGCT GA
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Protein sequence | MTTGQRPTAQ PGTGEEEPLP TIAEQMADQL GGWRGLLESS IPVVVFVVAN IIGELRPAVI AAVAVAVFIA ALRLAQRRPV RHAVNGLFGI AIGAAIAWRT GNERDFYLPG ILYGMGYGVV LLLSAAIRQP LVGWIWSVLV AKGASDWRQD PLLVRTFTRL TVLWGVVWLA KVGVQAGLYL AHQDTALGVA RLLLGYPPYV LLLLITVWTV RRVTRHTPQT PVG
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