Gene Strop_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1484 
Symbol 
ID5057937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1692186 
End bp1692857 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content71% 
IMG OID640473752 
Producthypothetical protein 
Protein accessionYP_001158328 
Protein GI145594031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.205776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGG GACAACGCCC AACGGCGCAG CCGGGCACGG GAGAGGAGGA ACCGCTCCCC 
ACCATCGCCG AGCAGATGGC CGACCAGCTG GGGGGCTGGC GCGGGCTGCT GGAGTCGAGC
ATTCCGGTGG TCGTCTTCGT GGTCGCCAAC ATCATCGGTG AGCTGCGTCC GGCGGTGATA
GCCGCGGTGG CGGTCGCGGT GTTCATCGCG GCCCTGCGTC TGGCCCAGCG GCGACCGGTG
CGGCACGCGG TGAACGGGCT GTTCGGCATC GCGATCGGCG CGGCGATCGC CTGGCGCACC
GGCAATGAGC GGGACTTCTA CCTGCCCGGC ATCCTCTACG GCATGGGCTA CGGCGTGGTG
CTGTTGCTCT CGGCGGCGAT CCGGCAGCCC CTGGTGGGCT GGATCTGGTC GGTTCTGGTG
GCCAAGGGCG CCTCCGACTG GCGTCAGGAT CCGCTCCTGG TGCGGACCTT TACCCGGCTG
ACCGTGCTCT GGGGGGTGGT CTGGCTGGCG AAGGTCGGGG TGCAGGCTGG GCTCTACCTT
GCTCACCAGG ACACCGCGCT CGGCGTCGCC CGGCTCCTGC TCGGCTACCC GCCGTACGTG
CTGCTCCTGC TGATCACGGT CTGGACGGTG CGTCGGGTGA CCCGGCACAC ACCCCAGACC
CCGGTCGGCT GA
 
Protein sequence
MTTGQRPTAQ PGTGEEEPLP TIAEQMADQL GGWRGLLESS IPVVVFVVAN IIGELRPAVI 
AAVAVAVFIA ALRLAQRRPV RHAVNGLFGI AIGAAIAWRT GNERDFYLPG ILYGMGYGVV
LLLSAAIRQP LVGWIWSVLV AKGASDWRQD PLLVRTFTRL TVLWGVVWLA KVGVQAGLYL
AHQDTALGVA RLLLGYPPYV LLLLITVWTV RRVTRHTPQT PVG