Gene Strop_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1466 
Symbol 
ID5057919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1673610 
End bp1677314 
Gene Length3705 bp 
Protein Length1234 aa 
Translation table11 
GC content68% 
IMG OID640473734 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_001158310 
Protein GI145594013 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1404] Subtilisin-like serine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.719877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.242964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATGT CTTCCCATCC AAGCCCCTTC GCGGCTGGCG GATCACGGCG GCGGCTGATC 
GCCGCCGTCG TGGCAGCCGG GATGATCGCG GCCTCAACCG CCGCGATCGA TCCGGCCGCC
GCGACCGCCG GCCCGCCCCC GACAACCGCC CCTCTCGCCG CCCCGGAGAC GCACACCGTC
ACCCTGGTCA CCGGCGACGT CGTCACCGTC CGGACCCTCG CCGACGGCAA GACGCTCACC
GAGGTCGACC AACCAGACGA CGCCACCGGC GGCTTCAGCG TCCAACAACA CGGCGACGAC
CTCTATGTCC TGCCCGACGA GGCGATACCC CTACTGGCCG ACGATCAACT CGACCAGCGG
CTGTTCAACG TCACCGACCT CATCGAGATG GGCTACGACG ACGCTGGCAC GAGCCAGCTG
CCGCTGATCG CCACCTACCC GGAAGCGTCA GTCCGCACCA CCGCCGCAGT GCGCGGCACG
CGAATCGTCC ACGATCTACC CGCCATCAAC GGCCACTCCC TCACCACCGA CAAGGAACAG
GCCCGGACCC TCTGGTCCAC CCTCACCAGC GGCTCCGGCT CCAGCGCGAA CCGCGAAAGC
AGCGGCATCA CCAAGCTCTG GCTCGACGGC CAGGTACACA GCACCCTCGC CGACAGCGTC
CCCCAGGTCG GCGCCCCCGA AGCCTGGGAC GCCGGCTACG ACGGCGACGG CGTCACCGTC
GCCGTCCTCG ACACCGGCAT CGACCCCACC CACCCCGACC TCGCCGACCA CATCCAGGAC
ACGGTCAGCT TCGTCCCCGA CGAAGACCCC ACCGACCCGC GGGGGCACGG CACCCACGTC
GCCTCGATCA TCGCCGGCAC CGGAGCGGCC TCCGACGGCG ACAACACCGG CGTCGCCCCC
GGAGCCGATC TGATCATCGG TAAAGTCCTC AACAACAACG GCATCGGCTA CGACTCCTGG
ATCATCGCCG GCATGCAGTG GGCCGCCGAA TCCGGCGCCG ACGTGGTCAA CATGAGCCTC
GGCAACGCGG CGCGCACCGA TGTCCTCGAC CCGATGACCC TCGCCGTGGA TGCCCTCTCC
GCCCAGCACG ACACCCTCTT CGTCATCGCC GCCGGCAACA ACGGAATGAC CATCGGCACG
CCCGGCAACG CCGAAAGCGC CCTCACCGTC GGCGCCGTCG ACAAACAGGA CCTACTCGCC
GGATTCTCCA GCGTCGGACC ACTGGCCTAC AGTGGAGCCG TCAAGCCCGA CCTCACCGCC
CCCGGCGTCG CCGTCAACGC CGCCCGCTCC CAACAGAGCA CCGGTGACGG CATGTACGTG
AGCAAGACCG GCACCTCCAT GGCGGCTCCG CACGTGGCCG GAGCCGCGGC CATCCTCGCC
CAACAACACC CCGAGTGGAC CAACACCCAG CTCAAAGACG CCCTCATGAG CAGCGCCGAG
GATCTGGGCG ACAGCTACAC CGCGTTCCAG GTCGGCACCG GACGGCTGGA TGTGGCAGCG
GCCGTGGACA GCACCGTACG CGCCGCCGGC TCCGCGTTCA TCGGTTACTT CGAATGGCCA
CACCAGCCCA CGGACGCTCC CGTCACGGAG CCGGTGACGT TCACCAACAG CGGTGCCACC
GCCGTCACCC TCGACCTGGC CACCACCGGC AGCAACGCGT TCACCCTCGA CACCCCGACG
GTGACCGTGC CGGCGGGCGG CCAGGCAGAC GTCCCGGTGA CGGCCGACCC GAATGGGATC
GCCATCGGCT CGTACACCGG CTACCTCGTC GGCACCGATC CGACCACCGG TCAGACCGTC
ACCCGCACCG CCCTCGGGCT CCTCAAGGAA GACGAACGCT ACGGCCTGAC CATCAAAGCC
CGCGACCACA ATGGCGAGCC CATGCGGGCG TTCGTCCTGC TGCGGGCGGA CGGCGAGTGG
TTCCCCCGAT ACATCGACGT CGATGGTGAA CGAACGCTAC GCCTCCCACC GGGGAACTAC
ACGATGGAGA CGAAGGCGGA GGTGCCAGGT GAACGAGCGG ACTCCCTCGG CCTCGCCCTG
CTGGCCGCCC CGGAAACCGT GCTCGACAAA CCAACCGAGG TGACCCTGGA CGCCAGCCAG
GCCCGTCTCC TCGACACCAC CACACCCCAA CGCACCCAGG ACCGACAGCG CCTGCTCCAG
TACACCATCG ACCACGGAGC CGGTACCGGC CCGTACTATT ACCTCCATTC TATCGCGCCG
GAATACGATG ACGTGTACGT CCTACCGACC GAGAGGAGCG TCGAGAACCC CTTCGCCATG
GCAGCGAGAT GGCGCAAGGG TGAGCCGGTC CTGAGCCTGC GCGCCCTCGG CCTGCTCCCG
ATCGACGCCG TGGTCCAACC CGGCAGCACC ATCACCACCG GCAAACAGTG GCTACGCCCC
GTCTACGCCG GCACCGGCGC ACCCAAGGAC TACACCGACC TTGACGTCGA CGGCAGAGTC
GCCGTGGTAA CCCGCAGCGA CGAGGTCAGC GCACCCGACC GGGCCGCCGC CGCGGCAACC
GCCGGAGCCG AACTACTCCT GGTCGTCAAC GACAGCCCGG GAATCCTCTA CGAGCACGTC
GGCGAATCGC CCATCCCCGT CGCCAGCATC CACCGTGACA TCGGAGAACT CCTGACCACA
CTCGCCACAC ACGGGACACC GCCGCTGAAG GTCGACCAGG AGAAGTACCC CGACACCATC
TACGACCTGG CCCAGGTCTG GCGGGAACAG GTGCCCGACC AACCCCTCAC CTACCACCCC
AGCCACCACG ACCTGGCCCG CATCGACGCC CGCTACCACG CGGACCAGGA CACCGAAGGT
TCCGGCTACC GCACCGACAC GGCCATCGGC GTCCCATACG CGAACCTCGA GCCGGAGTGG
CATCCCGGCA CCCGCACCGA ATGGGTCACC CCGGACATCC CCTGGGTCGA GAGCCACCGA
CAGCGTGATT CCACAGTCGT GGCGGACCCG CACACCTACA CAAAGGGCAC GACCACCAGG
CTGGACTGGT TCGCACCCGC CATTCGACCG GCCTTCAACC AGTCAGCCTG GACCAAAAAC
AGTCGGTATC AGGACCGGAT GACCCTCAGC CCGCACCCAT GGAGCCCGTC GGGCACCGTG
CTCGACTACC GCGGGATTAT GAGGTATCCC ACGGCGCAGG AACACCTCAA GCTCTATCAG
GGTGACACCC TGCTGCACGA GGACGAGAAT TTCTCCCACC TGATCAAAAG AGAGGTGCCG
GCCGGGACGC TGCCGTACCG GCTGGTACTG GACGCGTCCC GCCCGGCTGA CGAGTGGCGG
CTGTCCACCC GTACCCACAC CGAGTGGGAC TTCATCTCCA GCACCAACCA GGCTGGGCCG
TCCGAACCCC TCCCCATCAC GCTGCTCCAA CTCGACTACG AGTTGGAGAC CGACCTGCGG
GGCGACGTCA AAGCCGGCAC CCGCCAGGAG ATCAGCATCA CGGCGAGACC GCAGCCCGGC
GGCTCCGGCA CCGGCATCAT CACCGCGGTG GAGCTCGAGG TCTCCTACGA CGACGGCACC
ACCTGGCAAC CAGTCACCCT CACCCAGGGC GACAACGACC GCCACACCGG CACCCTGAAG
CTGCCAAAAG ACCGCGACGG CTTCATCTCC GTACGAGCCA CCGCGCAAAC CGACACCGGC
TTCGCCATCC GCCAAGAAAT CATCCGCGCC TACGGCCTGC GATGA
 
Protein sequence
MPMSSHPSPF AAGGSRRRLI AAVVAAGMIA ASTAAIDPAA ATAGPPPTTA PLAAPETHTV 
TLVTGDVVTV RTLADGKTLT EVDQPDDATG GFSVQQHGDD LYVLPDEAIP LLADDQLDQR
LFNVTDLIEM GYDDAGTSQL PLIATYPEAS VRTTAAVRGT RIVHDLPAIN GHSLTTDKEQ
ARTLWSTLTS GSGSSANRES SGITKLWLDG QVHSTLADSV PQVGAPEAWD AGYDGDGVTV
AVLDTGIDPT HPDLADHIQD TVSFVPDEDP TDPRGHGTHV ASIIAGTGAA SDGDNTGVAP
GADLIIGKVL NNNGIGYDSW IIAGMQWAAE SGADVVNMSL GNAARTDVLD PMTLAVDALS
AQHDTLFVIA AGNNGMTIGT PGNAESALTV GAVDKQDLLA GFSSVGPLAY SGAVKPDLTA
PGVAVNAARS QQSTGDGMYV SKTGTSMAAP HVAGAAAILA QQHPEWTNTQ LKDALMSSAE
DLGDSYTAFQ VGTGRLDVAA AVDSTVRAAG SAFIGYFEWP HQPTDAPVTE PVTFTNSGAT
AVTLDLATTG SNAFTLDTPT VTVPAGGQAD VPVTADPNGI AIGSYTGYLV GTDPTTGQTV
TRTALGLLKE DERYGLTIKA RDHNGEPMRA FVLLRADGEW FPRYIDVDGE RTLRLPPGNY
TMETKAEVPG ERADSLGLAL LAAPETVLDK PTEVTLDASQ ARLLDTTTPQ RTQDRQRLLQ
YTIDHGAGTG PYYYLHSIAP EYDDVYVLPT ERSVENPFAM AARWRKGEPV LSLRALGLLP
IDAVVQPGST ITTGKQWLRP VYAGTGAPKD YTDLDVDGRV AVVTRSDEVS APDRAAAAAT
AGAELLLVVN DSPGILYEHV GESPIPVASI HRDIGELLTT LATHGTPPLK VDQEKYPDTI
YDLAQVWREQ VPDQPLTYHP SHHDLARIDA RYHADQDTEG SGYRTDTAIG VPYANLEPEW
HPGTRTEWVT PDIPWVESHR QRDSTVVADP HTYTKGTTTR LDWFAPAIRP AFNQSAWTKN
SRYQDRMTLS PHPWSPSGTV LDYRGIMRYP TAQEHLKLYQ GDTLLHEDEN FSHLIKREVP
AGTLPYRLVL DASRPADEWR LSTRTHTEWD FISSTNQAGP SEPLPITLLQ LDYELETDLR
GDVKAGTRQE ISITARPQPG GSGTGIITAV ELEVSYDDGT TWQPVTLTQG DNDRHTGTLK
LPKDRDGFIS VRATAQTDTG FAIRQEIIRA YGLR