Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1456 |
Symbol | |
ID | 5057909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1658708 |
End bp | 1659406 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640473724 |
Product | iron dependent repressor |
Protein accession | YP_001158300 |
Protein GI | 145594003 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.534251 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGAGA TCATCGCGCA CTCACTGGTC GACACGACCG AGATGTACCT GCGGACCATC CTCGAGCTCG AGGAGGAGGG TGTGCCGCCG CTTCGTGCCC GCATCGCCGA GCGGCTGCGC CAGAGCGGCC CCACCGTCAG CCAGACCGTC GCCCGGATGG AGCGGGACGG CCTGCTCACC GTGGAGGGCG ACCGGCACCT GACGCTCACC GACGCCGGCC GCGACGCGGC GGTCTCCGTG ATGCGTAAAC ATCGGCTGGC GGAGCTCCTG CTGGTCAACG TGATCGGAAT GCCCTACGAG GAGGCCCACG AGGAGGCCTG CCGGTGGGAG CACGTCATGA GCGACGCCGT CGAACAACGG GTCTATGACC TGCTCAACCG CCCGACCCGG TCGCCGTACG GCAACCCGAT CCCCGGGCTG GAGGCGCTGG GCTCAGCAGG CCCCTCCGCT GCCGAGCCCG CCGAGGGCGA ACGCAACCTG GCGTTCCCCG GCCTCTCCGG CACGGTCGTG GTCCGACGGA TCTGCGAAAG CCTGCAAACC AACTCGGATG TGTTACGCCA GCTGCACGCC GCCGGGGTCG ATCCGGGTGC CACGGTGACG GTCGCTCAGG AGCGGGACGG CGTGTCGATC GACCGCTACG GCGACCGCGT CCGCCTCCCC CGCGAGGTGG CCTCCCGCGT CTTCGTCGCC GCCGGCTGA
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Protein sequence | MIEIIAHSLV DTTEMYLRTI LELEEEGVPP LRARIAERLR QSGPTVSQTV ARMERDGLLT VEGDRHLTLT DAGRDAAVSV MRKHRLAELL LVNVIGMPYE EAHEEACRWE HVMSDAVEQR VYDLLNRPTR SPYGNPIPGL EALGSAGPSA AEPAEGERNL AFPGLSGTVV VRRICESLQT NSDVLRQLHA AGVDPGATVT VAQERDGVSI DRYGDRVRLP REVASRVFVA AG
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