Gene Strop_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1456 
Symbol 
ID5057909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1658708 
End bp1659406 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content71% 
IMG OID640473724 
Productiron dependent repressor 
Protein accessionYP_001158300 
Protein GI145594003 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.534251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGAGA TCATCGCGCA CTCACTGGTC GACACGACCG AGATGTACCT GCGGACCATC 
CTCGAGCTCG AGGAGGAGGG TGTGCCGCCG CTTCGTGCCC GCATCGCCGA GCGGCTGCGC
CAGAGCGGCC CCACCGTCAG CCAGACCGTC GCCCGGATGG AGCGGGACGG CCTGCTCACC
GTGGAGGGCG ACCGGCACCT GACGCTCACC GACGCCGGCC GCGACGCGGC GGTCTCCGTG
ATGCGTAAAC ATCGGCTGGC GGAGCTCCTG CTGGTCAACG TGATCGGAAT GCCCTACGAG
GAGGCCCACG AGGAGGCCTG CCGGTGGGAG CACGTCATGA GCGACGCCGT CGAACAACGG
GTCTATGACC TGCTCAACCG CCCGACCCGG TCGCCGTACG GCAACCCGAT CCCCGGGCTG
GAGGCGCTGG GCTCAGCAGG CCCCTCCGCT GCCGAGCCCG CCGAGGGCGA ACGCAACCTG
GCGTTCCCCG GCCTCTCCGG CACGGTCGTG GTCCGACGGA TCTGCGAAAG CCTGCAAACC
AACTCGGATG TGTTACGCCA GCTGCACGCC GCCGGGGTCG ATCCGGGTGC CACGGTGACG
GTCGCTCAGG AGCGGGACGG CGTGTCGATC GACCGCTACG GCGACCGCGT CCGCCTCCCC
CGCGAGGTGG CCTCCCGCGT CTTCGTCGCC GCCGGCTGA
 
Protein sequence
MIEIIAHSLV DTTEMYLRTI LELEEEGVPP LRARIAERLR QSGPTVSQTV ARMERDGLLT 
VEGDRHLTLT DAGRDAAVSV MRKHRLAELL LVNVIGMPYE EAHEEACRWE HVMSDAVEQR
VYDLLNRPTR SPYGNPIPGL EALGSAGPSA AEPAEGERNL AFPGLSGTVV VRRICESLQT
NSDVLRQLHA AGVDPGATVT VAQERDGVSI DRYGDRVRLP REVASRVFVA AG