| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1441 |
|---|
| Symbol | |
|---|
| ID | 5057894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 1638416 |
|---|
| End bp | 1639480 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640473709 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001158285 |
|---|
| Protein GI | 145593988 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.390278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.33934 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCGATC CTCACGTTCA ACCCACAATC GATCTCGCGT CGCTACCGAC GATCACCCCA
ATATCCGGAA TCGGAGCCAT GACCGAGACA TCCAGATCCG GCGACAGCCC TGCGGACAAG
CCTTCGGTCA GCCCACCACC GGGCACCAGC CGCCGCGAGC AACGCGACGA GGCACCACCA
CACGCCGCCG GAAAGCCGAG CGCGACGTGG CGCTCCGACG CGGAGATCGA CAACCTACTG
AACCAACTGG ACGGCCCACC CCGTTCAGCC AGCCCACGAG ACAGCCCACC CCGGCCAGGC
AAGGCAGAGC CACCAGCAGT CGCCTCCCCA CCGATCAGGG CAGCGTGCTC GGATGGCACA
CCCCCACCAG ACAACGCCGC CTGCTCGAAC AGACCGTCGG GGTCGGACAG TCCCGGTCGC
CGGGCCCTAC GCCCCGTCAG ATGGCTTGCG GATGTTCGCC GTTCGGCCCC GCCGCAACTG
CGGCGTCACC ACATCGTCGC GGTGGGCTCC TTGGGGATCA TCCTGACCGC GTTTGCCGTC
AACGCGCTCC ACCACCCACC AAAGGAATCG TCGCCGGCCA TCGCCACCGA CGCGTTCCCC
AGCAATGAGG CCAGGCCGCT CGCCCCGTCA GCTACGCAGT CGCTGCCCCC GTCCCCGACC
CCGACCCAGT CTCCGTCCCC GACGCCGACA CCCATCAAGA TGGCTGTGGG CGCCCGCCCG
GCACCGCCCA CGAGTCCGCC GCGGACCTCC ACGGCATCGG CATCGGCATC GGCATCGCCG
ACACCGAGTG GGCTACCGGC CCTTCCCCCG TCCGACGCGG CCTGCCAGAA GTCAGTGGAC
GGCGGCGCCT GGACGACCGT CGTATTCCGC AACGAACGAC AGGAGACGAT CCAGGTGTAC
TGGATCAACC ACAGCGGGGA ACGTCACCGC TATGCGGATG TCGCACCTGG TGAATCATTC
ACTGTGCACA CCTTCCCCGC TCATCCATGG GTGGTGACCG AAAACGACAA GGACCTGGCC
TGCTACCGAC CCGCGACGGC GAAGGCGACG GCGGTGGTCC GCTAG
|
|---|
| Protein sequence | MTDPHVQPTI DLASLPTITP ISGIGAMTET SRSGDSPADK PSVSPPPGTS RREQRDEAPP
HAAGKPSATW RSDAEIDNLL NQLDGPPRSA SPRDSPPRPG KAEPPAVASP PIRAACSDGT
PPPDNAACSN RPSGSDSPGR RALRPVRWLA DVRRSAPPQL RRHHIVAVGS LGIILTAFAV
NALHHPPKES SPAIATDAFP SNEARPLAPS ATQSLPPSPT PTQSPSPTPT PIKMAVGARP
APPTSPPRTS TASASASASP TPSGLPALPP SDAACQKSVD GGAWTTVVFR NERQETIQVY
WINHSGERHR YADVAPGESF TVHTFPAHPW VVTENDKDLA CYRPATAKAT AVVR
|
|---|
| |