Gene Strop_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1426 
Symbol 
ID5057879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1603201 
End bp1603863 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content73% 
IMG OID640473694 
Productregulatory protein RecX 
Protein accessionYP_001158270 
Protein GI145593973 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.032748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTCAC GACGAGCCCG CGCGGGTCGG GGGTGGGACG CCAGCCCACC GCGTACGGGT 
GACGCGGCCA CGGCGGCGGC TCCCCGTCGT GGTCGCCGTA ACGCCGACGC CGCGACCAAC
TCGGCCTCGT CCACGGACGA GGCCGAGTTG GCCCGGGAGG TCTGTCTGCG GCAGCTCGCC
GTGCGTCCGC GTACCCGGGC CGAGCTGGCT CGGGCGCTGA CGCGGCGGGG TATCTCGGCG
GAGGTCGCCA CCGTGGTCCT CGACCGTTAC GACGAGGTCG GGATGATCGA CGACGCGGCT
TTCGCGCGGG CCTGGGTCTC CAGCCGGCAC GTCGGCCGTG GCCTCGCCCG CCGTGCCCTC
GCCACCGAGC TGCGCCAGCG CGGCGTCGAT GGTGACGTGG CGAAGTCCGC GCTCGGCGAA
CTGGACGACG AGACCGAGGC GGAGACGGCC CGTGCCCTGG CGGAGCGGAA GCTGCGCGTC
ACCCGGGGTG AGCCGGACGC GGTGTTTCGG CGATTGGTCG GCATGCTGGC CCGCAAGGGC
TACTCACCGG GGGTGGCGAT TCGGGCGGTG AAAGAGGCCC TTGCGGCGCA GAGTGCCGAG
GCGGCCGAGT TCGCGGAGCA GATCGACGCC GAGGCGCTCA GCGACATCGA GGTCGATCCT
TGA
 
Protein sequence
MTSRRARAGR GWDASPPRTG DAATAAAPRR GRRNADAATN SASSTDEAEL AREVCLRQLA 
VRPRTRAELA RALTRRGISA EVATVVLDRY DEVGMIDDAA FARAWVSSRH VGRGLARRAL
ATELRQRGVD GDVAKSALGE LDDETEAETA RALAERKLRV TRGEPDAVFR RLVGMLARKG
YSPGVAIRAV KEALAAQSAE AAEFAEQIDA EALSDIEVDP