| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1387 |
|---|
| Symbol | |
|---|
| ID | 5057840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1556690 |
|---|
| End bp | 1557292 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640473656 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001158232 |
|---|
| Protein GI | 145593935 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGACG TGACGAGCGT TGACGGGCCG CAGAGCCGGG CCGCCGCGGC GACTGATGCC
CCGGCCCATC CCGACGGTGT GGGCGGGCCG TCTGACGGCG CTGTCGCGCC CGACGGCTGG
CCGGTGGGGG CGGTGCCGGC CTATCCGGTC CCGCAGCCGG ACCGACTGAC CCGATTCGTG
CTCCGCCTCC AGGAGCGCTC GCCTCGCTGG GCAGTGCCGC TGGCCGCCCT GGGCTGTGTC
GGCGCCGGCA TCGGCTACAC GCTGTTGTTC GATCCGACCC GGTCCGCGCC GGATGCGGCC
CCCACCTGCC TGCTCAAGCT GACGACCGGG CTCGACTGTC CGGGCTGTGG CGGCACCCGG
GCCCTCTGGT ACCTGCTGCA TGCGGACCTG CCGGCAGCTG CCCGGCACCA TGTCCTCCTC
GTCTTCGCGC TGCCCTTCCT GGCGTACCTG TTCGTGACGT GGGCGGGCCG GCAGGCCTTC
GGGTGGCGGT TGCCCGAGCT GCGGATCAGC AACAAGCTGA TCGGGGTCTT CCTGGCCGCC
TGGTTGGCTT TCTCGGTGGT GCGTAACCTG CCCTGGGCGC CGTTCACCGC GCTCTACGTC
TGA
|
|---|
| Protein sequence | MIDVTSVDGP QSRAAAATDA PAHPDGVGGP SDGAVAPDGW PVGAVPAYPV PQPDRLTRFV
LRLQERSPRW AVPLAALGCV GAGIGYTLLF DPTRSAPDAA PTCLLKLTTG LDCPGCGGTR
ALWYLLHADL PAAARHHVLL VFALPFLAYL FVTWAGRQAF GWRLPELRIS NKLIGVFLAA
WLAFSVVRNL PWAPFTALYV
|
|---|
| |